Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
GAPDHP04406 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GAPDHP04406 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
GAPDHP04406 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.22■□□□□ 0.67
GAPDHP04406 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GAPDHP04406 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.22■□□□□ 0.67
GAPDHP04406 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
GAPDHP04406 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GAPDHP04406 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.22■□□□□ 0.67
GAPDHP04406 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GAPDHP04406 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GAPDHP04406 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GAPDHP04406 AL117328.2-201ENST00000624617 1940 ntBASIC19.21■□□□□ 0.67
GAPDHP04406 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
GAPDHP04406 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
GAPDHP04406 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
GAPDHP04406 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GAPDHP04406 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GAPDHP04406 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GAPDHP04406 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
GAPDHP04406 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GAPDHP04406 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
GAPDHP04406 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GAPDHP04406 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.21■□□□□ 0.67
GAPDHP04406 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GAPDHP04406 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GAPDHP04406 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GAPDHP04406 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GAPDHP04406 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
GAPDHP04406 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GAPDHP04406 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GAPDHP04406 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
GAPDHP04406 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GAPDHP04406 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GAPDHP04406 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.2■□□□□ 0.66
GAPDHP04406 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GAPDHP04406 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
GAPDHP04406 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.19■□□□□ 0.66
GAPDHP04406 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
GAPDHP04406 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GAPDHP04406 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GAPDHP04406 AC087393.1-201ENST00000582896 145 ntBASIC19.19■□□□□ 0.66
GAPDHP04406 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
GAPDHP04406 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GAPDHP04406 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GAPDHP04406 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
GAPDHP04406 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
GAPDHP04406 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
GAPDHP04406 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.18■□□□□ 0.66
GAPDHP04406 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GAPDHP04406 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.18■□□□□ 0.66
GAPDHP04406 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
GAPDHP04406 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GAPDHP04406 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
GAPDHP04406 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GAPDHP04406 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GAPDHP04406 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GAPDHP04406 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GAPDHP04406 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
GAPDHP04406 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
GAPDHP04406 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GAPDHP04406 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.17■□□□□ 0.66
GAPDHP04406 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.17■□□□□ 0.66
GAPDHP04406 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GAPDHP04406 DUX4L18-201ENST00000553347 1267 ntBASIC19.17■□□□□ 0.66
GAPDHP04406 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GAPDHP04406 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.17■□□□□ 0.66
GAPDHP04406 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GAPDHP04406 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
GAPDHP04406 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GAPDHP04406 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GAPDHP04406 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GAPDHP04406 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GAPDHP04406 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GAPDHP04406 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
GAPDHP04406 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GAPDHP04406 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GAPDHP04406 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
GAPDHP04406 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.16■□□□□ 0.66
GAPDHP04406 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GAPDHP04406 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GAPDHP04406 ATP5G2P3-201ENST00000429083 425 ntBASIC19.16■□□□□ 0.66
GAPDHP04406 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.16■□□□□ 0.66
GAPDHP04406 AC139795.1-202ENST00000500444 432 ntBASIC19.16■□□□□ 0.66
GAPDHP04406 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
GAPDHP04406 AC012354.3-201ENST00000623734 483 ntBASIC19.16■□□□□ 0.66
GAPDHP04406 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.16■□□□□ 0.66
GAPDHP04406 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GAPDHP04406 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GAPDHP04406 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GAPDHP04406 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
GAPDHP04406 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GAPDHP04406 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GAPDHP04406 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GAPDHP04406 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
GAPDHP04406 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GAPDHP04406 AC004987.1-201ENST00000428627 508 ntBASIC19.15■□□□□ 0.66
GAPDHP04406 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.15■□□□□ 0.66
GAPDHP04406 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GAPDHP04406 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms