Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
PRAMEF25A6NGN4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF25A6NGN4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF25A6NGN4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.69■■□□□ 1.06
PRAMEF25A6NGN4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.69■■□□□ 1.06
PRAMEF25A6NGN4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF25A6NGN4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.69■■□□□ 1.06
PRAMEF25A6NGN4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF25A6NGN4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF25A6NGN4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.68■■□□□ 1.06
PRAMEF25A6NGN4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF25A6NGN4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF25A6NGN4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF25A6NGN4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF25A6NGN4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PRAMEF25A6NGN4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF25A6NGN4 ABCB10P4-201ENST00000566803 2184 ntBASIC21.68■■□□□ 1.06
PRAMEF25A6NGN4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.67■■□□□ 1.06
PRAMEF25A6NGN4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEF25A6NGN4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PRAMEF25A6NGN4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.67■■□□□ 1.06
PRAMEF25A6NGN4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.67■■□□□ 1.06
PRAMEF25A6NGN4 YBX1P4-201ENST00000392794 808 ntBASIC21.67■■□□□ 1.06
PRAMEF25A6NGN4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PRAMEF25A6NGN4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEF25A6NGN4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEF25A6NGN4 HLA-L-211ENST00000482052 1765 ntBASIC21.66■■□□□ 1.06
PRAMEF25A6NGN4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF25A6NGN4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PRAMEF25A6NGN4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF25A6NGN4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PRAMEF25A6NGN4 AL592295.1-201ENST00000400984 884 ntBASIC21.66■■□□□ 1.06
PRAMEF25A6NGN4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.66■■□□□ 1.06
PRAMEF25A6NGN4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
PRAMEF25A6NGN4 MIR4508-201ENST00000584178 70 ntBASIC21.66■■□□□ 1.06
PRAMEF25A6NGN4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.66■■□□□ 1.06
PRAMEF25A6NGN4 FOXO3B-201ENST00000395675 1928 ntBASIC21.66■■□□□ 1.06
PRAMEF25A6NGN4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.65■■□□□ 1.06
PRAMEF25A6NGN4 RARRES2P1-201ENST00000474487 481 ntBASIC21.65■■□□□ 1.06
PRAMEF25A6NGN4 AC022616.5-201ENST00000518796 181 ntBASIC21.65■■□□□ 1.06
PRAMEF25A6NGN4 AC103834.1-201ENST00000520383 144 ntBASIC21.65■■□□□ 1.06
PRAMEF25A6NGN4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEF25A6NGN4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PRAMEF25A6NGN4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.65■■□□□ 1.06
PRAMEF25A6NGN4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.06
PRAMEF25A6NGN4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRAMEF25A6NGN4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.64■■□□□ 1.05
PRAMEF25A6NGN4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.64■■□□□ 1.05
PRAMEF25A6NGN4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PRAMEF25A6NGN4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRAMEF25A6NGN4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRAMEF25A6NGN4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRAMEF25A6NGN4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRAMEF25A6NGN4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF25A6NGN4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF25A6NGN4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF25A6NGN4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF25A6NGN4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF25A6NGN4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PRAMEF25A6NGN4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF25A6NGN4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.63■■□□□ 1.05
PRAMEF25A6NGN4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF25A6NGN4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.63■■□□□ 1.05
PRAMEF25A6NGN4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.63■■□□□ 1.05
PRAMEF25A6NGN4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF25A6NGN4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF25A6NGN4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF25A6NGN4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRAMEF25A6NGN4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.62■■□□□ 1.05
PRAMEF25A6NGN4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.62■■□□□ 1.05
PRAMEF25A6NGN4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRAMEF25A6NGN4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.62■■□□□ 1.05
PRAMEF25A6NGN4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRAMEF25A6NGN4 AC068473.5-201ENST00000616428 2072 ntBASIC21.62■■□□□ 1.05
PRAMEF25A6NGN4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PRAMEF25A6NGN4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.61■■□□□ 1.05
PRAMEF25A6NGN4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
PRAMEF25A6NGN4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF25A6NGN4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF25A6NGN4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PRAMEF25A6NGN4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.61■■□□□ 1.05
PRAMEF25A6NGN4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF25A6NGN4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF25A6NGN4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF25A6NGN4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PRAMEF25A6NGN4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.61■■□□□ 1.05
PRAMEF25A6NGN4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF25A6NGN4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF25A6NGN4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PRAMEF25A6NGN4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF25A6NGN4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF25A6NGN4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF25A6NGN4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.6■■□□□ 1.05
PRAMEF25A6NGN4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PRAMEF25A6NGN4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRAMEF25A6NGN4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.6■■□□□ 1.05
PRAMEF25A6NGN4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
PRAMEF25A6NGN4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.6■■□□□ 1.05
PRAMEF25A6NGN4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PRAMEF25A6NGN4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 180.8 ms