Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV22A0A0B4J277 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV22A0A0B4J277 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV22A0A0B4J277 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV22A0A0B4J277 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
TRAV22A0A0B4J277 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV22A0A0B4J277 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV22A0A0B4J277 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV22A0A0B4J277 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV22A0A0B4J277 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TRAV22A0A0B4J277 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV22A0A0B4J277 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TRAV22A0A0B4J277 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
TRAV22A0A0B4J277 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV22A0A0B4J277 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV22A0A0B4J277 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV22A0A0B4J277 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV22A0A0B4J277 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV22A0A0B4J277 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV22A0A0B4J277 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TRAV22A0A0B4J277 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV22A0A0B4J277 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV22A0A0B4J277 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV22A0A0B4J277 AL391422.3-201ENST00000603791 2761 ntBASIC13.09□□□□□ -0.31
TRAV22A0A0B4J277 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV22A0A0B4J277 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV22A0A0B4J277 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TRAV22A0A0B4J277 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV22A0A0B4J277 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
TRAV22A0A0B4J277 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV22A0A0B4J277 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV22A0A0B4J277 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV22A0A0B4J277 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV22A0A0B4J277 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV22A0A0B4J277 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
TRAV22A0A0B4J277 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
TRAV22A0A0B4J277 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TRAV22A0A0B4J277 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC13.08□□□□□ -0.31
TRAV22A0A0B4J277 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TRAV22A0A0B4J277 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAV22A0A0B4J277 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
TRAV22A0A0B4J277 FOXO3B-201ENST00000395675 1928 ntBASIC13.08□□□□□ -0.32
TRAV22A0A0B4J277 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
TRAV22A0A0B4J277 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV22A0A0B4J277 DUSP8P3-201ENST00000399571 1760 ntBASIC13.08□□□□□ -0.32
TRAV22A0A0B4J277 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV22A0A0B4J277 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAV22A0A0B4J277 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAV22A0A0B4J277 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAV22A0A0B4J277 AF106564.1-201ENST00000607058 2553 ntBASIC13.08□□□□□ -0.32
TRAV22A0A0B4J277 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TRAV22A0A0B4J277 AC004812.2-201ENST00000611079 2094 ntBASIC13.08□□□□□ -0.32
TRAV22A0A0B4J277 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV22A0A0B4J277 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV22A0A0B4J277 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV22A0A0B4J277 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV22A0A0B4J277 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV22A0A0B4J277 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV22A0A0B4J277 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TRAV22A0A0B4J277 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
TRAV22A0A0B4J277 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC13.07□□□□□ -0.32
TRAV22A0A0B4J277 KLF16-203ENST00000592313 508 ntTSL 3 BASIC13.07□□□□□ -0.32
TRAV22A0A0B4J277 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV22A0A0B4J277 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
TRAV22A0A0B4J277 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV22A0A0B4J277 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAV22A0A0B4J277 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV22A0A0B4J277 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV22A0A0B4J277 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV22A0A0B4J277 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV22A0A0B4J277 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAV22A0A0B4J277 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAV22A0A0B4J277 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV22A0A0B4J277 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC13.06□□□□□ -0.32
TRAV22A0A0B4J277 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV22A0A0B4J277 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV22A0A0B4J277 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV22A0A0B4J277 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV22A0A0B4J277 ZNRF2P1-201ENST00000441407 443 ntBASIC13.06□□□□□ -0.32
TRAV22A0A0B4J277 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
TRAV22A0A0B4J277 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV22A0A0B4J277 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV22A0A0B4J277 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV22A0A0B4J277 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV22A0A0B4J277 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV22A0A0B4J277 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV22A0A0B4J277 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TRAV22A0A0B4J277 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV22A0A0B4J277 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TRAV22A0A0B4J277 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAV22A0A0B4J277 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TRAV22A0A0B4J277 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV22A0A0B4J277 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV22A0A0B4J277 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
TRAV22A0A0B4J277 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAV22A0A0B4J277 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TRAV22A0A0B4J277 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
TRAV22A0A0B4J277 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV22A0A0B4J277 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV22A0A0B4J277 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms