Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.8■■□□□ 1.24
CSNK1G3Q9Y6M4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CSNK1G3Q9Y6M4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.8■■□□□ 1.24
CSNK1G3Q9Y6M4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
CSNK1G3Q9Y6M4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.79■■□□□ 1.24
CSNK1G3Q9Y6M4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.79■■□□□ 1.24
CSNK1G3Q9Y6M4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CSNK1G3Q9Y6M4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CSNK1G3Q9Y6M4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CSNK1G3Q9Y6M4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CSNK1G3Q9Y6M4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CSNK1G3Q9Y6M4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.79■■□□□ 1.24
CSNK1G3Q9Y6M4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CSNK1G3Q9Y6M4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CSNK1G3Q9Y6M4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.78■■□□□ 1.24
CSNK1G3Q9Y6M4 AC110285.6-201ENST00000617652 491 ntBASIC22.78■■□□□ 1.24
CSNK1G3Q9Y6M4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
CSNK1G3Q9Y6M4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.78■■□□□ 1.24
CSNK1G3Q9Y6M4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CSNK1G3Q9Y6M4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CSNK1G3Q9Y6M4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CSNK1G3Q9Y6M4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.77■■□□□ 1.24
CSNK1G3Q9Y6M4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
CSNK1G3Q9Y6M4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CSNK1G3Q9Y6M4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.77■■□□□ 1.24
CSNK1G3Q9Y6M4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CSNK1G3Q9Y6M4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CSNK1G3Q9Y6M4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.76■■□□□ 1.23
CSNK1G3Q9Y6M4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CSNK1G3Q9Y6M4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.76■■□□□ 1.23
CSNK1G3Q9Y6M4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CSNK1G3Q9Y6M4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.76■■□□□ 1.23
CSNK1G3Q9Y6M4 AC133561.4-201ENST00000566112 224 ntBASIC22.76■■□□□ 1.23
CSNK1G3Q9Y6M4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.76■■□□□ 1.23
CSNK1G3Q9Y6M4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CSNK1G3Q9Y6M4 AC096631.2-201ENST00000436136 790 ntBASIC22.75■■□□□ 1.23
CSNK1G3Q9Y6M4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.75■■□□□ 1.23
CSNK1G3Q9Y6M4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
CSNK1G3Q9Y6M4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CSNK1G3Q9Y6M4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CSNK1G3Q9Y6M4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CSNK1G3Q9Y6M4 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.75■■□□□ 1.23
CSNK1G3Q9Y6M4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.75■■□□□ 1.23
CSNK1G3Q9Y6M4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CSNK1G3Q9Y6M4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CSNK1G3Q9Y6M4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CSNK1G3Q9Y6M4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.74■■□□□ 1.23
CSNK1G3Q9Y6M4 MIR935-201ENST00000401179 91 ntBASIC22.74■■□□□ 1.23
CSNK1G3Q9Y6M4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.74■■□□□ 1.23
CSNK1G3Q9Y6M4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.74■■□□□ 1.23
CSNK1G3Q9Y6M4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.74■■□□□ 1.23
CSNK1G3Q9Y6M4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.74■■□□□ 1.23
CSNK1G3Q9Y6M4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.74■■□□□ 1.23
CSNK1G3Q9Y6M4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
CSNK1G3Q9Y6M4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.73■■□□□ 1.23
CSNK1G3Q9Y6M4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.73■■□□□ 1.23
CSNK1G3Q9Y6M4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CSNK1G3Q9Y6M4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
CSNK1G3Q9Y6M4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CSNK1G3Q9Y6M4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.72■■□□□ 1.23
CSNK1G3Q9Y6M4 AC004448.1-201ENST00000458332 883 ntBASIC22.72■■□□□ 1.23
CSNK1G3Q9Y6M4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CSNK1G3Q9Y6M4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CSNK1G3Q9Y6M4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CSNK1G3Q9Y6M4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CSNK1G3Q9Y6M4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.71■■□□□ 1.23
CSNK1G3Q9Y6M4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.71■■□□□ 1.23
CSNK1G3Q9Y6M4 AC005837.3-201ENST00000612163 286 ntBASIC22.71■■□□□ 1.23
CSNK1G3Q9Y6M4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CSNK1G3Q9Y6M4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CSNK1G3Q9Y6M4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.71■■□□□ 1.23
CSNK1G3Q9Y6M4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.71■■□□□ 1.23
CSNK1G3Q9Y6M4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CSNK1G3Q9Y6M4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.71■■□□□ 1.23
CSNK1G3Q9Y6M4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
CSNK1G3Q9Y6M4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.71■■□□□ 1.23
CSNK1G3Q9Y6M4 AC092803.2-201ENST00000564287 1899 ntBASIC22.71■■□□□ 1.23
CSNK1G3Q9Y6M4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CSNK1G3Q9Y6M4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CSNK1G3Q9Y6M4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.7■■□□□ 1.22
CSNK1G3Q9Y6M4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CSNK1G3Q9Y6M4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.69■■□□□ 1.22
CSNK1G3Q9Y6M4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CSNK1G3Q9Y6M4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CSNK1G3Q9Y6M4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.69■■□□□ 1.22
CSNK1G3Q9Y6M4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.69■■□□□ 1.22
CSNK1G3Q9Y6M4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CSNK1G3Q9Y6M4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.69■■□□□ 1.22
CSNK1G3Q9Y6M4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CSNK1G3Q9Y6M4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CSNK1G3Q9Y6M4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CSNK1G3Q9Y6M4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CSNK1G3Q9Y6M4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
CSNK1G3Q9Y6M4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.68■■□□□ 1.22
CSNK1G3Q9Y6M4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CSNK1G3Q9Y6M4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CSNK1G3Q9Y6M4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CSNK1G3Q9Y6M4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CSNK1G3Q9Y6M4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CSNK1G3Q9Y6M4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms