Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
SPG7Q9UQ90 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC30.63■■■□□ 2.49
SPG7Q9UQ90 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC30.63■■■□□ 2.49
SPG7Q9UQ90 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC30.63■■■□□ 2.49
SPG7Q9UQ90 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SPG7Q9UQ90 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC30.63■■■□□ 2.49
SPG7Q9UQ90 SRD5A1P1-201ENST00000442297 786 ntBASIC30.63■■■□□ 2.49
SPG7Q9UQ90 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SPG7Q9UQ90 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
SPG7Q9UQ90 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
SPG7Q9UQ90 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC30.61■■■□□ 2.49
SPG7Q9UQ90 AL136162.1-201ENST00000607711 1078 ntBASIC30.61■■■□□ 2.49
SPG7Q9UQ90 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
SPG7Q9UQ90 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SPG7Q9UQ90 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
SPG7Q9UQ90 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SPG7Q9UQ90 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SPG7Q9UQ90 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
SPG7Q9UQ90 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SPG7Q9UQ90 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SPG7Q9UQ90 AC142381.2-201ENST00000566120 298 ntBASIC30.59■■■□□ 2.49
SPG7Q9UQ90 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC30.59■■■□□ 2.49
SPG7Q9UQ90 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SPG7Q9UQ90 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
SPG7Q9UQ90 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC30.58■■■□□ 2.49
SPG7Q9UQ90 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
SPG7Q9UQ90 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
SPG7Q9UQ90 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC30.58■■■□□ 2.49
SPG7Q9UQ90 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
SPG7Q9UQ90 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
SPG7Q9UQ90 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC30.57■■■□□ 2.48
SPG7Q9UQ90 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
SPG7Q9UQ90 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
SPG7Q9UQ90 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
SPG7Q9UQ90 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SPG7Q9UQ90 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
SPG7Q9UQ90 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC30.56■■■□□ 2.48
SPG7Q9UQ90 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC30.56■■■□□ 2.48
SPG7Q9UQ90 AC135279.3-201ENST00000610945 1311 ntBASIC30.56■■■□□ 2.48
SPG7Q9UQ90 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SPG7Q9UQ90 GUK1-205ENST00000366722 850 ntTSL 3 BASIC30.56■■■□□ 2.48
SPG7Q9UQ90 AL031432.3-201ENST00000607698 485 ntBASIC30.56■■■□□ 2.48
SPG7Q9UQ90 GATM-206ENST00000558336 1522 ntTSL 2 BASIC30.56■■■□□ 2.48
SPG7Q9UQ90 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
SPG7Q9UQ90 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
SPG7Q9UQ90 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SPG7Q9UQ90 ZNRF2P3-201ENST00000424200 374 ntBASIC30.55■■■□□ 2.48
SPG7Q9UQ90 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SPG7Q9UQ90 SUDS3P1-201ENST00000505831 966 ntBASIC30.55■■■□□ 2.48
SPG7Q9UQ90 AC092803.2-201ENST00000564287 1899 ntBASIC30.55■■■□□ 2.48
SPG7Q9UQ90 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC30.55■■■□□ 2.48
SPG7Q9UQ90 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC30.55■■■□□ 2.48
SPG7Q9UQ90 AC005703.6-201ENST00000623265 1329 ntBASIC30.54■■■□□ 2.48
SPG7Q9UQ90 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC30.54■■■□□ 2.48
SPG7Q9UQ90 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC30.54■■■□□ 2.48
SPG7Q9UQ90 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
SPG7Q9UQ90 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
SPG7Q9UQ90 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC30.53■■■□□ 2.48
SPG7Q9UQ90 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SPG7Q9UQ90 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SPG7Q9UQ90 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
SPG7Q9UQ90 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
SPG7Q9UQ90 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC30.52■■■□□ 2.48
SPG7Q9UQ90 AC024257.2-201ENST00000549699 147 ntBASIC30.52■■■□□ 2.48
SPG7Q9UQ90 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SPG7Q9UQ90 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SPG7Q9UQ90 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SPG7Q9UQ90 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SPG7Q9UQ90 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC30.51■■■□□ 2.48
SPG7Q9UQ90 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SPG7Q9UQ90 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
SPG7Q9UQ90 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC30.51■■■□□ 2.47
SPG7Q9UQ90 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC30.51■■■□□ 2.47
SPG7Q9UQ90 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC30.51■■■□□ 2.47
SPG7Q9UQ90 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
SPG7Q9UQ90 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
SPG7Q9UQ90 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC30.51■■■□□ 2.47
SPG7Q9UQ90 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.47
SPG7Q9UQ90 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SPG7Q9UQ90 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SPG7Q9UQ90 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SPG7Q9UQ90 EDA-201ENST00000338901 1233 ntBASIC30.5■■■□□ 2.47
SPG7Q9UQ90 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC30.5■■■□□ 2.47
SPG7Q9UQ90 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SPG7Q9UQ90 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC30.5■■■□□ 2.47
SPG7Q9UQ90 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SPG7Q9UQ90 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC30.49■■■□□ 2.47
SPG7Q9UQ90 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SPG7Q9UQ90 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC30.49■■■□□ 2.47
SPG7Q9UQ90 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SPG7Q9UQ90 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC30.49■■■□□ 2.47
SPG7Q9UQ90 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
SPG7Q9UQ90 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
SPG7Q9UQ90 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SPG7Q9UQ90 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
SPG7Q9UQ90 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC30.48■■■□□ 2.47
SPG7Q9UQ90 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
SPG7Q9UQ90 AL355001.2-201ENST00000620617 1191 ntBASIC30.48■■■□□ 2.47
SPG7Q9UQ90 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
SPG7Q9UQ90 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC30.48■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms