Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHGC3Q9UN70 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHGC3Q9UN70 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.64■■□□□ 1.53
PCDHGC3Q9UN70 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHGC3Q9UN70 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHGC3Q9UN70 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.64■■□□□ 1.53
PCDHGC3Q9UN70 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHGC3Q9UN70 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHGC3Q9UN70 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
PCDHGC3Q9UN70 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
PCDHGC3Q9UN70 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.63■■□□□ 1.53
PCDHGC3Q9UN70 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHGC3Q9UN70 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHGC3Q9UN70 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.63■■□□□ 1.53
PCDHGC3Q9UN70 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
PCDHGC3Q9UN70 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHGC3Q9UN70 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHGC3Q9UN70 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.62■■□□□ 1.53
PCDHGC3Q9UN70 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.62■■□□□ 1.53
PCDHGC3Q9UN70 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHGC3Q9UN70 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGC3Q9UN70 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.61■■□□□ 1.53
PCDHGC3Q9UN70 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGC3Q9UN70 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGC3Q9UN70 THA1P-201ENST00000590384 1145 ntBASIC24.61■■□□□ 1.53
PCDHGC3Q9UN70 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDHGC3Q9UN70 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGC3Q9UN70 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGC3Q9UN70 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGC3Q9UN70 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDHGC3Q9UN70 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGC3Q9UN70 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGC3Q9UN70 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGC3Q9UN70 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHGC3Q9UN70 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHGC3Q9UN70 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
PCDHGC3Q9UN70 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
PCDHGC3Q9UN70 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHGC3Q9UN70 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHGC3Q9UN70 YBX1P4-201ENST00000392794 808 ntBASIC24.59■■□□□ 1.53
PCDHGC3Q9UN70 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.59■■□□□ 1.53
PCDHGC3Q9UN70 KRT8P33-201ENST00000508125 1423 ntBASIC24.59■■□□□ 1.53
PCDHGC3Q9UN70 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
PCDHGC3Q9UN70 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHGC3Q9UN70 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHGC3Q9UN70 AC103724.3-201ENST00000564481 992 ntBASIC24.58■■□□□ 1.53
PCDHGC3Q9UN70 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
PCDHGC3Q9UN70 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
PCDHGC3Q9UN70 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
PCDHGC3Q9UN70 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.57■■□□□ 1.52
PCDHGC3Q9UN70 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHGC3Q9UN70 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHGC3Q9UN70 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHGC3Q9UN70 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHGC3Q9UN70 MIR4281-201ENST00000580852 62 ntBASIC24.57■■□□□ 1.52
PCDHGC3Q9UN70 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHGC3Q9UN70 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
PCDHGC3Q9UN70 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.56■■□□□ 1.52
PCDHGC3Q9UN70 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.56■■□□□ 1.52
PCDHGC3Q9UN70 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHGC3Q9UN70 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHGC3Q9UN70 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHGC3Q9UN70 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
PCDHGC3Q9UN70 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.55■■□□□ 1.52
PCDHGC3Q9UN70 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHGC3Q9UN70 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHGC3Q9UN70 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGC3Q9UN70 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGC3Q9UN70 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.54■■□□□ 1.52
PCDHGC3Q9UN70 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGC3Q9UN70 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.54■■□□□ 1.52
PCDHGC3Q9UN70 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGC3Q9UN70 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHGC3Q9UN70 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.53■■□□□ 1.52
PCDHGC3Q9UN70 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.53■■□□□ 1.52
PCDHGC3Q9UN70 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.53■■□□□ 1.52
PCDHGC3Q9UN70 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.53■■□□□ 1.52
PCDHGC3Q9UN70 AL161729.1-201ENST00000604104 1402 ntBASIC24.52■■□□□ 1.52
PCDHGC3Q9UN70 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHGC3Q9UN70 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHGC3Q9UN70 AF131216.4-201ENST00000638924 1588 ntBASIC24.52■■□□□ 1.52
PCDHGC3Q9UN70 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHGC3Q9UN70 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.52■■□□□ 1.52
PCDHGC3Q9UN70 AC004812.2-201ENST00000611079 2094 ntBASIC24.52■■□□□ 1.52
PCDHGC3Q9UN70 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.52■■□□□ 1.52
PCDHGC3Q9UN70 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.51■■□□□ 1.51
PCDHGC3Q9UN70 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.51■■□□□ 1.51
PCDHGC3Q9UN70 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHGC3Q9UN70 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHGC3Q9UN70 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
PCDHGC3Q9UN70 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHGC3Q9UN70 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHGC3Q9UN70 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
PCDHGC3Q9UN70 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHGC3Q9UN70 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHGC3Q9UN70 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHGC3Q9UN70 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHGC3Q9UN70 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.49■■□□□ 1.51
PCDHGC3Q9UN70 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHGC3Q9UN70 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 355.3 ms