Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.21■□□□□ 0.99
KRCC1Q9NPI7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.21■□□□□ 0.99
KRCC1Q9NPI7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
KRCC1Q9NPI7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
KRCC1Q9NPI7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRCC1Q9NPI7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.21■□□□□ 0.99
KRCC1Q9NPI7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRCC1Q9NPI7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
KRCC1Q9NPI7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRCC1Q9NPI7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRCC1Q9NPI7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KRCC1Q9NPI7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KRCC1Q9NPI7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.2■□□□□ 0.98
KRCC1Q9NPI7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KRCC1Q9NPI7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.2■□□□□ 0.98
KRCC1Q9NPI7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
KRCC1Q9NPI7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
KRCC1Q9NPI7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRCC1Q9NPI7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KRCC1Q9NPI7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRCC1Q9NPI7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRCC1Q9NPI7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
KRCC1Q9NPI7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRCC1Q9NPI7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KRCC1Q9NPI7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.19■□□□□ 0.98
KRCC1Q9NPI7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRCC1Q9NPI7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
KRCC1Q9NPI7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRCC1Q9NPI7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KRCC1Q9NPI7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KRCC1Q9NPI7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRCC1Q9NPI7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
KRCC1Q9NPI7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRCC1Q9NPI7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRCC1Q9NPI7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.18■□□□□ 0.98
KRCC1Q9NPI7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRCC1Q9NPI7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
KRCC1Q9NPI7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.17■□□□□ 0.98
KRCC1Q9NPI7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
KRCC1Q9NPI7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
KRCC1Q9NPI7 MIR4449-201ENST00000578365 66 ntBASIC21.17■□□□□ 0.98
KRCC1Q9NPI7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRCC1Q9NPI7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
KRCC1Q9NPI7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.17■□□□□ 0.98
KRCC1Q9NPI7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.16■□□□□ 0.98
KRCC1Q9NPI7 ABCB10P4-201ENST00000566803 2184 ntBASIC21.16■□□□□ 0.98
KRCC1Q9NPI7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KRCC1Q9NPI7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
KRCC1Q9NPI7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRCC1Q9NPI7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.16■□□□□ 0.98
KRCC1Q9NPI7 AC012676.1-201ENST00000574705 1949 ntBASIC21.16■□□□□ 0.98
KRCC1Q9NPI7 DUSP8P5-201ENST00000422884 1815 ntBASIC21.16■□□□□ 0.98
KRCC1Q9NPI7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.16■□□□□ 0.98
KRCC1Q9NPI7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRCC1Q9NPI7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRCC1Q9NPI7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRCC1Q9NPI7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRCC1Q9NPI7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRCC1Q9NPI7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
KRCC1Q9NPI7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KRCC1Q9NPI7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
KRCC1Q9NPI7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.15■□□□□ 0.98
KRCC1Q9NPI7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
KRCC1Q9NPI7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRCC1Q9NPI7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRCC1Q9NPI7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
KRCC1Q9NPI7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
KRCC1Q9NPI7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
KRCC1Q9NPI7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
KRCC1Q9NPI7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRCC1Q9NPI7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRCC1Q9NPI7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRCC1Q9NPI7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRCC1Q9NPI7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRCC1Q9NPI7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KRCC1Q9NPI7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KRCC1Q9NPI7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.13■□□□□ 0.97
KRCC1Q9NPI7 AC133552.2-201ENST00000619106 1032 ntBASIC21.13■□□□□ 0.97
KRCC1Q9NPI7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRCC1Q9NPI7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.13■□□□□ 0.97
KRCC1Q9NPI7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRCC1Q9NPI7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRCC1Q9NPI7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.12■□□□□ 0.97
KRCC1Q9NPI7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
KRCC1Q9NPI7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRCC1Q9NPI7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
KRCC1Q9NPI7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KRCC1Q9NPI7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KRCC1Q9NPI7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.12■□□□□ 0.97
KRCC1Q9NPI7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
KRCC1Q9NPI7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.12■□□□□ 0.97
KRCC1Q9NPI7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRCC1Q9NPI7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRCC1Q9NPI7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
KRCC1Q9NPI7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRCC1Q9NPI7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRCC1Q9NPI7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
KRCC1Q9NPI7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
KRCC1Q9NPI7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRCC1Q9NPI7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms