Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH20Q9HBT6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH20Q9HBT6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CDH20Q9HBT6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.22■□□□□ 0.83
CDH20Q9HBT6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
CDH20Q9HBT6 MIR4281-201ENST00000580852 62 ntBASIC20.22■□□□□ 0.83
CDH20Q9HBT6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH20Q9HBT6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CDH20Q9HBT6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH20Q9HBT6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH20Q9HBT6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH20Q9HBT6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH20Q9HBT6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH20Q9HBT6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH20Q9HBT6 AC138932.3-201ENST00000567634 1902 ntBASIC20.2■□□□□ 0.82
CDH20Q9HBT6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH20Q9HBT6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.2■□□□□ 0.82
CDH20Q9HBT6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH20Q9HBT6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.2■□□□□ 0.82
CDH20Q9HBT6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH20Q9HBT6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.2■□□□□ 0.82
CDH20Q9HBT6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH20Q9HBT6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH20Q9HBT6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH20Q9HBT6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH20Q9HBT6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CDH20Q9HBT6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH20Q9HBT6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH20Q9HBT6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.19■□□□□ 0.82
CDH20Q9HBT6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CDH20Q9HBT6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.19■□□□□ 0.82
CDH20Q9HBT6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH20Q9HBT6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH20Q9HBT6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDH20Q9HBT6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDH20Q9HBT6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH20Q9HBT6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CDH20Q9HBT6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.18■□□□□ 0.82
CDH20Q9HBT6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH20Q9HBT6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH20Q9HBT6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDH20Q9HBT6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDH20Q9HBT6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH20Q9HBT6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH20Q9HBT6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.17■□□□□ 0.82
CDH20Q9HBT6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH20Q9HBT6 AL451085.2-201ENST00000605085 799 ntBASIC20.17■□□□□ 0.82
CDH20Q9HBT6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.17■□□□□ 0.82
CDH20Q9HBT6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH20Q9HBT6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH20Q9HBT6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.16■□□□□ 0.82
CDH20Q9HBT6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH20Q9HBT6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CDH20Q9HBT6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH20Q9HBT6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH20Q9HBT6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH20Q9HBT6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.16■□□□□ 0.82
CDH20Q9HBT6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH20Q9HBT6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH20Q9HBT6 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH20Q9HBT6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CDH20Q9HBT6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDH20Q9HBT6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH20Q9HBT6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CDH20Q9HBT6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH20Q9HBT6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH20Q9HBT6 BX664725.1-201ENST00000438252 379 ntBASIC20.15■□□□□ 0.82
CDH20Q9HBT6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.15■□□□□ 0.82
CDH20Q9HBT6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CDH20Q9HBT6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CDH20Q9HBT6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH20Q9HBT6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDH20Q9HBT6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH20Q9HBT6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.15■□□□□ 0.82
CDH20Q9HBT6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH20Q9HBT6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDH20Q9HBT6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CDH20Q9HBT6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.14■□□□□ 0.81
CDH20Q9HBT6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH20Q9HBT6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.14■□□□□ 0.81
CDH20Q9HBT6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CDH20Q9HBT6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.14■□□□□ 0.81
CDH20Q9HBT6 AC009299.2-201ENST00000482477 511 ntBASIC20.14■□□□□ 0.81
CDH20Q9HBT6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CDH20Q9HBT6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH20Q9HBT6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH20Q9HBT6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH20Q9HBT6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH20Q9HBT6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.13■□□□□ 0.81
CDH20Q9HBT6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH20Q9HBT6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CDH20Q9HBT6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.13■□□□□ 0.81
CDH20Q9HBT6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH20Q9HBT6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH20Q9HBT6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CDH20Q9HBT6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDH20Q9HBT6 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDH20Q9HBT6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDH20Q9HBT6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH20Q9HBT6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms