Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.9■□□□□ 0.94
KRTCAP3Q53RY4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRTCAP3Q53RY4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
KRTCAP3Q53RY4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.89■□□□□ 0.94
KRTCAP3Q53RY4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KRTCAP3Q53RY4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KRTCAP3Q53RY4 AC005703.6-201ENST00000623265 1329 ntBASIC20.89■□□□□ 0.93
KRTCAP3Q53RY4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRTCAP3Q53RY4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.89■□□□□ 0.93
KRTCAP3Q53RY4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KRTCAP3Q53RY4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRTCAP3Q53RY4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KRTCAP3Q53RY4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KRTCAP3Q53RY4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.88■□□□□ 0.93
KRTCAP3Q53RY4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
KRTCAP3Q53RY4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.88■□□□□ 0.93
KRTCAP3Q53RY4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
KRTCAP3Q53RY4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KRTCAP3Q53RY4 UNC93B3-201ENST00000308076 687 ntBASIC20.88■□□□□ 0.93
KRTCAP3Q53RY4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRTCAP3Q53RY4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
KRTCAP3Q53RY4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
KRTCAP3Q53RY4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KRTCAP3Q53RY4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.88■□□□□ 0.93
KRTCAP3Q53RY4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.88■□□□□ 0.93
KRTCAP3Q53RY4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRTCAP3Q53RY4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
KRTCAP3Q53RY4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
KRTCAP3Q53RY4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRTCAP3Q53RY4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.87■□□□□ 0.93
KRTCAP3Q53RY4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRTCAP3Q53RY4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
KRTCAP3Q53RY4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
KRTCAP3Q53RY4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KRTCAP3Q53RY4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
KRTCAP3Q53RY4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
KRTCAP3Q53RY4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.86■□□□□ 0.93
KRTCAP3Q53RY4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
KRTCAP3Q53RY4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KRTCAP3Q53RY4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.86■□□□□ 0.93
KRTCAP3Q53RY4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.86■□□□□ 0.93
KRTCAP3Q53RY4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRTCAP3Q53RY4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
KRTCAP3Q53RY4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRTCAP3Q53RY4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
KRTCAP3Q53RY4 DUX4L19-201ENST00000557448 1267 ntBASIC20.85■□□□□ 0.93
KRTCAP3Q53RY4 AC142381.2-201ENST00000566120 298 ntBASIC20.85■□□□□ 0.93
KRTCAP3Q53RY4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRTCAP3Q53RY4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.84■□□□□ 0.93
KRTCAP3Q53RY4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRTCAP3Q53RY4 AC092803.2-201ENST00000564287 1899 ntBASIC20.84■□□□□ 0.93
KRTCAP3Q53RY4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRTCAP3Q53RY4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRTCAP3Q53RY4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.84■□□□□ 0.93
KRTCAP3Q53RY4 AL136162.1-201ENST00000607711 1078 ntBASIC20.84■□□□□ 0.93
KRTCAP3Q53RY4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRTCAP3Q53RY4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRTCAP3Q53RY4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRTCAP3Q53RY4 AC135279.3-201ENST00000610945 1311 ntBASIC20.83■□□□□ 0.93
KRTCAP3Q53RY4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
KRTCAP3Q53RY4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRTCAP3Q53RY4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
KRTCAP3Q53RY4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.83■□□□□ 0.93
KRTCAP3Q53RY4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
KRTCAP3Q53RY4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
KRTCAP3Q53RY4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.83■□□□□ 0.93
KRTCAP3Q53RY4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
KRTCAP3Q53RY4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
KRTCAP3Q53RY4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.83■□□□□ 0.92
KRTCAP3Q53RY4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KRTCAP3Q53RY4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
KRTCAP3Q53RY4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
KRTCAP3Q53RY4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.82■□□□□ 0.92
KRTCAP3Q53RY4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRTCAP3Q53RY4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.82■□□□□ 0.92
KRTCAP3Q53RY4 EDA-201ENST00000338901 1233 ntBASIC20.82■□□□□ 0.92
KRTCAP3Q53RY4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.82■□□□□ 0.92
KRTCAP3Q53RY4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KRTCAP3Q53RY4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KRTCAP3Q53RY4 AC092171.4-201ENST00000609130 632 ntBASIC20.82■□□□□ 0.92
KRTCAP3Q53RY4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRTCAP3Q53RY4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
KRTCAP3Q53RY4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRTCAP3Q53RY4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
KRTCAP3Q53RY4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRTCAP3Q53RY4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KRTCAP3Q53RY4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRTCAP3Q53RY4 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.81■□□□□ 0.92
KRTCAP3Q53RY4 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.81■□□□□ 0.92
KRTCAP3Q53RY4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KRTCAP3Q53RY4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRTCAP3Q53RY4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KRTCAP3Q53RY4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRTCAP3Q53RY4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
KRTCAP3Q53RY4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRTCAP3Q53RY4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.8■□□□□ 0.92
KRTCAP3Q53RY4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KRTCAP3Q53RY4 AL355001.2-201ENST00000620617 1191 ntBASIC20.8■□□□□ 0.92
KRTCAP3Q53RY4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRTCAP3Q53RY4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms