Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 NMA1YLR328W 1206 nt7.63□□□□□ -1.19
RKR1Q04781 KTR5YNL029C 1569 nt7.62□□□□□ -1.19
RKR1Q04781 STB3YDR169C 1542 nt7.62□□□□□ -1.19
RKR1Q04781 FAP1YNL023C 2898 nt7.62□□□□□ -1.19
RKR1Q04781 IWR1YDL115C 1062 nt7.62□□□□□ -1.19
RKR1Q04781 RAP1YNL216W 2484 nt7.61□□□□□ -1.19
RKR1Q04781 CTS1YLR286C 1689 nt7.61□□□□□ -1.19
RKR1Q04781 MTW1YAL034W-A 870 nt7.61□□□□□ -1.19
RKR1Q04781 YLR157W-DYLR157W-D 213 nt7.61□□□□□ -1.19
RKR1Q04781 YLR364C-AYLR364C-A 123 nt7.61□□□□□ -1.19
RKR1Q04781 PCL1YNL289W 840 nt7.61□□□□□ -1.19
RKR1Q04781 YPL199CYPL199C 723 nt7.61□□□□□ -1.19
RKR1Q04781 SNU71YGR013W 1863 nt7.6□□□□□ -1.19
RKR1Q04781 ESC8YOL017W 2145 nt7.6□□□□□ -1.19
RKR1Q04781 NPT1YOR209C 1290 nt7.6□□□□□ -1.19
RKR1Q04781 MRI1YPR118W 1236 nt7.6□□□□□ -1.19
RKR1Q04781 RIO1YOR119C 1455 nt7.6□□□□□ -1.19
RKR1Q04781 ECM30YLR436C 3825 nt7.6□□□□□ -1.19
RKR1Q04781 tL(UAG)JtL(UAG)J 82 nt7.59□□□□□ -1.19
RKR1Q04781 tL(UAG)L1tL(UAG)L1 82 nt7.59□□□□□ -1.19
RKR1Q04781 tL(UAG)L2tL(UAG)L2 82 nt7.59□□□□□ -1.19
RKR1Q04781 XPT1YJR133W 630 nt7.59□□□□□ -1.19
RKR1Q04781 CIN5YOR028C 888 nt7.59□□□□□ -1.19
RKR1Q04781 SUP56tL(CAA)A 82 nt7.59□□□□□ -1.2
RKR1Q04781 SUP53tL(CAA)C 82 nt7.59□□□□□ -1.2
RKR1Q04781 tL(CAA)DtL(CAA)D 82 nt7.59□□□□□ -1.2
RKR1Q04781 tL(CAA)G1tL(CAA)G1 82 nt7.59□□□□□ -1.2
RKR1Q04781 SUP54tL(CAA)G2 82 nt7.59□□□□□ -1.2
RKR1Q04781 tL(CAA)G3tL(CAA)G3 82 nt7.59□□□□□ -1.2
RKR1Q04781 tL(CAA)KtL(CAA)K 82 nt7.59□□□□□ -1.2
RKR1Q04781 tL(CAA)LtL(CAA)L 82 nt7.59□□□□□ -1.2
RKR1Q04781 tL(CAA)MtL(CAA)M 82 nt7.59□□□□□ -1.2
RKR1Q04781 tL(CAA)NtL(CAA)N 82 nt7.59□□□□□ -1.2
RKR1Q04781 RGS2YOR107W 930 nt7.58□□□□□ -1.2
RKR1Q04781 TIP41YPR040W 1071 nt7.58□□□□□ -1.2
RKR1Q04781 STE50YCL032W 1041 nt7.57□□□□□ -1.2
RKR1Q04781 MTC5YDR128W 3447 nt7.55□□□□□ -1.2
RKR1Q04781 MAG2YLR427W 2013 nt7.55□□□□□ -1.2
RKR1Q04781 ARF2YDL137W 546 nt7.55□□□□□ -1.2
RKR1Q04781 BUD16YEL029C 939 nt7.55□□□□□ -1.2
RKR1Q04781 CTR2YHR175W 570 nt7.55□□□□□ -1.2
RKR1Q04781 URE2YNL229C 1065 nt7.55□□□□□ -1.2
RKR1Q04781 ETT1YOR051C 1239 nt7.55□□□□□ -1.2
RKR1Q04781 AZR1YGR224W 1842 nt7.55□□□□□ -1.2
RKR1Q04781 THI5YFL058W 1023 nt7.54□□□□□ -1.2
RKR1Q04781 MPM1YJL066C 759 nt7.54□□□□□ -1.2
RKR1Q04781 THI12YNL332W 1023 nt7.54□□□□□ -1.2
RKR1Q04781 RGD1YBR260C 2001 nt7.54□□□□□ -1.2
RKR1Q04781 ATG26YLR189C 3597 nt7.54□□□□□ -1.2
RKR1Q04781 YJL107CYJL107C 1164 nt7.54□□□□□ -1.2
RKR1Q04781 RFU1YLR073C 603 nt7.54□□□□□ -1.2
RKR1Q04781 RPL15BYMR121C 615 nt7.54□□□□□ -1.2
RKR1Q04781 HIR2YOR038C 2628 nt7.53□□□□□ -1.2
RKR1Q04781 YLR154W-BYLR154W-B 165 nt7.53□□□□□ -1.2
RKR1Q04781 YPR169W-AYPR169W-A 219 nt7.53□□□□□ -1.2
RKR1Q04781 YPR170W-BYPR170W-B 258 nt7.53□□□□□ -1.2
RKR1Q04781 ZUO1YGR285C 1302 nt7.52□□□□□ -1.2
RKR1Q04781 AMA1YGR225W 1782 nt7.52□□□□□ -1.2
RKR1Q04781 RCK1YGL158W 1539 nt7.52□□□□□ -1.21
RKR1Q04781 PDC1YLR044C 1692 nt7.52□□□□□ -1.21
RKR1Q04781 RAT1YOR048C 3021 nt7.51□□□□□ -1.21
RKR1Q04781 MSB3YNL293W 1902 nt7.51□□□□□ -1.21
RKR1Q04781 DAK1YML070W 1755 nt7.5□□□□□ -1.21
RKR1Q04781 ADE3YGR204W 2841 nt7.5□□□□□ -1.21
RKR1Q04781 PTK2YJR059W 2457 nt7.5□□□□□ -1.21
RKR1Q04781 GRS1YBR121C 2004 nt7.5□□□□□ -1.21
RKR1Q04781 FRT2YAL028W 1587 nt7.5□□□□□ -1.21
RKR1Q04781 CIA2YHR122W 696 nt7.5□□□□□ -1.21
RKR1Q04781 AIF1YNR074C 1137 nt7.5□□□□□ -1.21
RKR1Q04781 ECM23YPL021W 564 nt7.5□□□□□ -1.21
RKR1Q04781 SPR6YER115C 576 nt7.49□□□□□ -1.21
RKR1Q04781 TBF1YPL128C 1689 nt7.49□□□□□ -1.21
RKR1Q04781 ACO1YLR304C 2337 nt7.48□□□□□ -1.21
RKR1Q04781 ABF1YKL112W 2196 nt7.48□□□□□ -1.21
RKR1Q04781 CLP1YOR250C 1338 nt7.48□□□□□ -1.21
RKR1Q04781 FOX2YKR009C 2703 nt7.47□□□□□ -1.21
RKR1Q04781 CTS2YDR371W 1536 nt7.47□□□□□ -1.21
RKR1Q04781 AIR2YDL175C 1035 nt7.47□□□□□ -1.21
RKR1Q04781 YAR019W-AYAR019W-A 333 nt7.47□□□□□ -1.21
RKR1Q04781 IDP3YNL009W 1263 nt7.47□□□□□ -1.21
RKR1Q04781 YNL181WYNL181W 1224 nt7.47□□□□□ -1.21
RKR1Q04781 BPL1YDL141W 2073 nt7.47□□□□□ -1.21
RKR1Q04781 GMC1YDR506C 1827 nt7.47□□□□□ -1.21
RKR1Q04781 SSH4YKL124W 1740 nt7.47□□□□□ -1.21
RKR1Q04781 RPL14AYKL006W 417 nt7.46□□□□□ -1.21
RKR1Q04781 SAP30YMR263W 606 nt7.46□□□□□ -1.21
RKR1Q04781 YBL070CYBL070C 321 nt7.46□□□□□ -1.21
RKR1Q04781 SSZ1YHR064C 1617 nt7.46□□□□□ -1.22
RKR1Q04781 YGL152CYGL152C 678 nt7.46□□□□□ -1.22
RKR1Q04781 MRPL20YKR085C 588 nt7.46□□□□□ -1.22
RKR1Q04781 GSP2YOR185C 663 nt7.46□□□□□ -1.22
RKR1Q04781 UMP1YBR173C 447 nt7.45□□□□□ -1.22
RKR1Q04781 SKI2YLR398C 3864 nt7.44□□□□□ -1.22
RKR1Q04781 TRS23YDR246W 660 nt7.44□□□□□ -1.22
RKR1Q04781 YGR066CYGR066C 879 nt7.44□□□□□ -1.22
RKR1Q04781 SLZ1YNL196C 897 nt7.44□□□□□ -1.22
RKR1Q04781 CUE2YKL090W 1332 nt7.44□□□□□ -1.22
RKR1Q04781 PDR18YNR070W 4002 nt7.44□□□□□ -1.22
RKR1Q04781 VTS1YOR359W 1572 nt7.44□□□□□ -1.22
RKR1Q04781 UBC8YEL012W 657 nt7.43□□□□□ -1.22
Retrieved 100 of 7,029 protein–RNA pairs in 80.8 ms