Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CSNK1A1P48729 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CSNK1A1P48729 HLA-L-211ENST00000482052 1765 ntBASIC20.64■□□□□ 0.89
CSNK1A1P48729 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
CSNK1A1P48729 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CSNK1A1P48729 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.64■□□□□ 0.89
CSNK1A1P48729 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CSNK1A1P48729 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSNK1A1P48729 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSNK1A1P48729 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSNK1A1P48729 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSNK1A1P48729 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
CSNK1A1P48729 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSNK1A1P48729 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.62■□□□□ 0.89
CSNK1A1P48729 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.62■□□□□ 0.89
CSNK1A1P48729 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSNK1A1P48729 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.62■□□□□ 0.89
CSNK1A1P48729 KRT8P33-201ENST00000508125 1423 ntBASIC20.61■□□□□ 0.89
CSNK1A1P48729 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.61■□□□□ 0.89
CSNK1A1P48729 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSNK1A1P48729 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CSNK1A1P48729 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.61■□□□□ 0.89
CSNK1A1P48729 MIR4508-201ENST00000584178 70 ntBASIC20.61■□□□□ 0.89
CSNK1A1P48729 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSNK1A1P48729 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSNK1A1P48729 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1A1P48729 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1A1P48729 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1A1P48729 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.6■□□□□ 0.89
CSNK1A1P48729 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CSNK1A1P48729 YBX1P4-201ENST00000392794 808 ntBASIC20.6■□□□□ 0.89
CSNK1A1P48729 AC120024.1-201ENST00000562672 995 ntBASIC20.6■□□□□ 0.89
CSNK1A1P48729 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CSNK1A1P48729 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.6■□□□□ 0.89
CSNK1A1P48729 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1A1P48729 THA1P-201ENST00000590384 1145 ntBASIC20.6■□□□□ 0.89
CSNK1A1P48729 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1A1P48729 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.6■□□□□ 0.89
CSNK1A1P48729 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1A1P48729 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CSNK1A1P48729 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CSNK1A1P48729 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1A1P48729 AC141586.4-201ENST00000624558 1573 ntBASIC20.59■□□□□ 0.89
CSNK1A1P48729 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1A1P48729 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1A1P48729 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1A1P48729 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1A1P48729 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.59■□□□□ 0.89
CSNK1A1P48729 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.59■□□□□ 0.89
CSNK1A1P48729 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1A1P48729 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1A1P48729 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSNK1A1P48729 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.58■□□□□ 0.89
CSNK1A1P48729 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.58■□□□□ 0.89
CSNK1A1P48729 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSNK1A1P48729 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CSNK1A1P48729 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSNK1A1P48729 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.58■□□□□ 0.89
CSNK1A1P48729 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSNK1A1P48729 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
CSNK1A1P48729 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CSNK1A1P48729 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CSNK1A1P48729 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.58■□□□□ 0.88
CSNK1A1P48729 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CSNK1A1P48729 LINC00543-201ENST00000567234 1845 ntBASIC20.57■□□□□ 0.88
CSNK1A1P48729 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.57■□□□□ 0.88
CSNK1A1P48729 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1A1P48729 KRT18P24-201ENST00000344739 1156 ntBASIC20.57■□□□□ 0.88
CSNK1A1P48729 AC093323.1-202ENST00000635031 2045 ntBASIC20.56■□□□□ 0.88
CSNK1A1P48729 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1A1P48729 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.56■□□□□ 0.88
CSNK1A1P48729 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1A1P48729 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1A1P48729 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.56■□□□□ 0.88
CSNK1A1P48729 AC103834.1-201ENST00000520383 144 ntBASIC20.56■□□□□ 0.88
CSNK1A1P48729 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.56■□□□□ 0.88
CSNK1A1P48729 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1A1P48729 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1A1P48729 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1A1P48729 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1A1P48729 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1A1P48729 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1A1P48729 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1A1P48729 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.54■□□□□ 0.88
CSNK1A1P48729 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CSNK1A1P48729 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1A1P48729 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1A1P48729 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1A1P48729 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1A1P48729 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1A1P48729 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.54■□□□□ 0.88
CSNK1A1P48729 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1A1P48729 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1A1P48729 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1A1P48729 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1A1P48729 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.54■□□□□ 0.88
CSNK1A1P48729 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
CSNK1A1P48729 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
CSNK1A1P48729 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1A1P48729 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms