Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.36■□□□□ 0.53
IFNA1P01562 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.36■□□□□ 0.53
IFNA1P01562 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.36■□□□□ 0.53
IFNA1P01562 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IFNA1P01562 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IFNA1P01562 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.35■□□□□ 0.53
IFNA1P01562 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
IFNA1P01562 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IFNA1P01562 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IFNA1P01562 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IFNA1P01562 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.34■□□□□ 0.53
IFNA1P01562 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IFNA1P01562 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IFNA1P01562 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IFNA1P01562 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
IFNA1P01562 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IFNA1P01562 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IFNA1P01562 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IFNA1P01562 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.34■□□□□ 0.53
IFNA1P01562 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
IFNA1P01562 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
IFNA1P01562 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.34■□□□□ 0.53
IFNA1P01562 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
IFNA1P01562 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
IFNA1P01562 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
IFNA1P01562 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
IFNA1P01562 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.33■□□□□ 0.53
IFNA1P01562 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
IFNA1P01562 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.33■□□□□ 0.53
IFNA1P01562 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IFNA1P01562 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.33■□□□□ 0.52
IFNA1P01562 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.52
IFNA1P01562 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.33■□□□□ 0.52
IFNA1P01562 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IFNA1P01562 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IFNA1P01562 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFNA1P01562 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.32■□□□□ 0.52
IFNA1P01562 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.32■□□□□ 0.52
IFNA1P01562 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IFNA1P01562 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.32■□□□□ 0.52
IFNA1P01562 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.32■□□□□ 0.52
IFNA1P01562 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.32■□□□□ 0.52
IFNA1P01562 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.32■□□□□ 0.52
IFNA1P01562 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
IFNA1P01562 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IFNA1P01562 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IFNA1P01562 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFNA1P01562 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.32■□□□□ 0.52
IFNA1P01562 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFNA1P01562 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFNA1P01562 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.31■□□□□ 0.52
IFNA1P01562 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.31■□□□□ 0.52
IFNA1P01562 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFNA1P01562 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IFNA1P01562 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFNA1P01562 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IFNA1P01562 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
IFNA1P01562 CAHM-201ENST00000604200 896 ntBASIC18.31■□□□□ 0.52
IFNA1P01562 MIR6090-201ENST00000622481 60 ntBASIC18.31■□□□□ 0.52
IFNA1P01562 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.31■□□□□ 0.52
IFNA1P01562 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFNA1P01562 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IFNA1P01562 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
IFNA1P01562 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.31■□□□□ 0.52
IFNA1P01562 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.31■□□□□ 0.52
IFNA1P01562 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFNA1P01562 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
IFNA1P01562 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
IFNA1P01562 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFNA1P01562 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFNA1P01562 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
IFNA1P01562 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
IFNA1P01562 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
IFNA1P01562 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
IFNA1P01562 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.3■□□□□ 0.52
IFNA1P01562 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.3■□□□□ 0.52
IFNA1P01562 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IFNA1P01562 EP400NL-214ENST00000641289 2402 ntBASIC18.3■□□□□ 0.52
IFNA1P01562 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IFNA1P01562 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
IFNA1P01562 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.29■□□□□ 0.52
IFNA1P01562 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IFNA1P01562 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IFNA1P01562 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
IFNA1P01562 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IFNA1P01562 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IFNA1P01562 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.29■□□□□ 0.52
IFNA1P01562 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IFNA1P01562 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
IFNA1P01562 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
IFNA1P01562 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
IFNA1P01562 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IFNA1P01562 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
IFNA1P01562 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
IFNA1P01562 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
IFNA1P01562 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IFNA1P01562 AC127496.7-201ENST00000625110 1798 ntBASIC18.28■□□□□ 0.52
IFNA1P01562 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.28■□□□□ 0.52
IFNA1P01562 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.28■□□□□ 0.52
IFNA1P01562 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms