Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.32■□□□□ 0.84
UPK1BO75841 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.32■□□□□ 0.84
UPK1BO75841 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
UPK1BO75841 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.31■□□□□ 0.84
UPK1BO75841 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.31■□□□□ 0.84
UPK1BO75841 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
UPK1BO75841 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UPK1BO75841 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UPK1BO75841 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.31■□□□□ 0.84
UPK1BO75841 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.31■□□□□ 0.84
UPK1BO75841 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UPK1BO75841 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPK1BO75841 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
UPK1BO75841 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPK1BO75841 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPK1BO75841 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPK1BO75841 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPK1BO75841 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPK1BO75841 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPK1BO75841 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.3■□□□□ 0.84
UPK1BO75841 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
UPK1BO75841 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UPK1BO75841 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UPK1BO75841 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.29■□□□□ 0.84
UPK1BO75841 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.29■□□□□ 0.84
UPK1BO75841 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UPK1BO75841 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UPK1BO75841 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
UPK1BO75841 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
UPK1BO75841 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.29■□□□□ 0.84
UPK1BO75841 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.29■□□□□ 0.84
UPK1BO75841 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.29■□□□□ 0.84
UPK1BO75841 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.28■□□□□ 0.84
UPK1BO75841 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
UPK1BO75841 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
UPK1BO75841 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
UPK1BO75841 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UPK1BO75841 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
UPK1BO75841 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
UPK1BO75841 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
UPK1BO75841 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
UPK1BO75841 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UPK1BO75841 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UPK1BO75841 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
UPK1BO75841 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UPK1BO75841 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
UPK1BO75841 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UPK1BO75841 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UPK1BO75841 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
UPK1BO75841 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
UPK1BO75841 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
UPK1BO75841 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
UPK1BO75841 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
UPK1BO75841 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.26■□□□□ 0.83
UPK1BO75841 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
UPK1BO75841 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
UPK1BO75841 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPK1BO75841 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UPK1BO75841 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPK1BO75841 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
UPK1BO75841 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPK1BO75841 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPK1BO75841 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPK1BO75841 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPK1BO75841 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
UPK1BO75841 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPK1BO75841 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.25■□□□□ 0.83
UPK1BO75841 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPK1BO75841 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
UPK1BO75841 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
UPK1BO75841 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPK1BO75841 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPK1BO75841 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.25■□□□□ 0.83
UPK1BO75841 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.25■□□□□ 0.83
UPK1BO75841 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UPK1BO75841 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPK1BO75841 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPK1BO75841 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UPK1BO75841 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UPK1BO75841 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.24■□□□□ 0.83
UPK1BO75841 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPK1BO75841 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.23■□□□□ 0.83
UPK1BO75841 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
UPK1BO75841 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPK1BO75841 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.23■□□□□ 0.83
UPK1BO75841 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPK1BO75841 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPK1BO75841 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UPK1BO75841 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPK1BO75841 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPK1BO75841 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPK1BO75841 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPK1BO75841 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UPK1BO75841 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPK1BO75841 AC110285.7-201ENST00000624417 1536 ntBASIC20.22■□□□□ 0.83
UPK1BO75841 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.21■□□□□ 0.83
UPK1BO75841 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPK1BO75841 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.21■□□□□ 0.83
UPK1BO75841 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.21■□□□□ 0.83
UPK1BO75841 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms