Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV4S1A1TA0A5B7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV4S1A1TA0A5B7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TCRBV4S1A1TA0A5B7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.59■□□□□ 0.57
TCRBV4S1A1TA0A5B7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TCRBV4S1A1TA0A5B7 AC239859.2-201ENST00000444165 318 ntBASIC18.59■□□□□ 0.57
TCRBV4S1A1TA0A5B7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TCRBV4S1A1TA0A5B7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TCRBV4S1A1TA0A5B7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TCRBV4S1A1TA0A5B7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TCRBV4S1A1TA0A5B7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TCRBV4S1A1TA0A5B7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TCRBV4S1A1TA0A5B7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TCRBV4S1A1TA0A5B7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TCRBV4S1A1TA0A5B7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TCRBV4S1A1TA0A5B7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TCRBV4S1A1TA0A5B7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TCRBV4S1A1TA0A5B7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.57■□□□□ 0.56
TCRBV4S1A1TA0A5B7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV4S1A1TA0A5B7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TCRBV4S1A1TA0A5B7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV4S1A1TA0A5B7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV4S1A1TA0A5B7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TCRBV4S1A1TA0A5B7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV4S1A1TA0A5B7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
TCRBV4S1A1TA0A5B7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV4S1A1TA0A5B7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.57■□□□□ 0.56
TCRBV4S1A1TA0A5B7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV4S1A1TA0A5B7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TCRBV4S1A1TA0A5B7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV4S1A1TA0A5B7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV4S1A1TA0A5B7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV4S1A1TA0A5B7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV4S1A1TA0A5B7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV4S1A1TA0A5B7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV4S1A1TA0A5B7 GUSBP5-201ENST00000418136 578 ntBASIC18.56■□□□□ 0.56
TCRBV4S1A1TA0A5B7 THA1P-201ENST00000590384 1145 ntBASIC18.56■□□□□ 0.56
TCRBV4S1A1TA0A5B7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV4S1A1TA0A5B7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV4S1A1TA0A5B7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV4S1A1TA0A5B7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV4S1A1TA0A5B7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TCRBV4S1A1TA0A5B7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TCRBV4S1A1TA0A5B7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TCRBV4S1A1TA0A5B7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV4S1A1TA0A5B7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
TCRBV4S1A1TA0A5B7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TCRBV4S1A1TA0A5B7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.55■□□□□ 0.56
TCRBV4S1A1TA0A5B7 KRT125P-201ENST00000546827 989 ntBASIC18.55■□□□□ 0.56
TCRBV4S1A1TA0A5B7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.55■□□□□ 0.56
TCRBV4S1A1TA0A5B7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.55■□□□□ 0.56
TCRBV4S1A1TA0A5B7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV4S1A1TA0A5B7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV4S1A1TA0A5B7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV4S1A1TA0A5B7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.54■□□□□ 0.56
TCRBV4S1A1TA0A5B7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.54■□□□□ 0.56
TCRBV4S1A1TA0A5B7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
TCRBV4S1A1TA0A5B7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV4S1A1TA0A5B7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV4S1A1TA0A5B7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV4S1A1TA0A5B7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV4S1A1TA0A5B7 Z92544.1-202ENST00000571933 1220 ntBASIC18.54■□□□□ 0.56
TCRBV4S1A1TA0A5B7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.54■□□□□ 0.56
TCRBV4S1A1TA0A5B7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV4S1A1TA0A5B7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.54■□□□□ 0.56
TCRBV4S1A1TA0A5B7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV4S1A1TA0A5B7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
TCRBV4S1A1TA0A5B7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV4S1A1TA0A5B7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV4S1A1TA0A5B7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV4S1A1TA0A5B7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.53■□□□□ 0.56
TCRBV4S1A1TA0A5B7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV4S1A1TA0A5B7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV4S1A1TA0A5B7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV4S1A1TA0A5B7 KRT18P24-201ENST00000344739 1156 ntBASIC18.53■□□□□ 0.56
TCRBV4S1A1TA0A5B7 BX664725.1-201ENST00000438252 379 ntBASIC18.53■□□□□ 0.56
TCRBV4S1A1TA0A5B7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.53■□□□□ 0.56
TCRBV4S1A1TA0A5B7 AC131212.1-201ENST00000613771 668 ntBASIC18.53■□□□□ 0.56
TCRBV4S1A1TA0A5B7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.53■□□□□ 0.56
TCRBV4S1A1TA0A5B7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV4S1A1TA0A5B7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV4S1A1TA0A5B7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV4S1A1TA0A5B7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.52■□□□□ 0.56
TCRBV4S1A1TA0A5B7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.52■□□□□ 0.56
TCRBV4S1A1TA0A5B7 AL592295.1-201ENST00000400984 884 ntBASIC18.52■□□□□ 0.56
TCRBV4S1A1TA0A5B7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
TCRBV4S1A1TA0A5B7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV4S1A1TA0A5B7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV4S1A1TA0A5B7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TCRBV4S1A1TA0A5B7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.52■□□□□ 0.55
TCRBV4S1A1TA0A5B7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.52■□□□□ 0.55
TCRBV4S1A1TA0A5B7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TCRBV4S1A1TA0A5B7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV4S1A1TA0A5B7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV4S1A1TA0A5B7 LINC00543-201ENST00000567234 1845 ntBASIC18.51■□□□□ 0.55
TCRBV4S1A1TA0A5B7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV4S1A1TA0A5B7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV4S1A1TA0A5B7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TCRBV4S1A1TA0A5B7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV4S1A1TA0A5B7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms