Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
CSNK1G3Q9Y6M4 AL139246.5-201ENST00000606645 996 ntBASIC22.92■■□□□ 1.26
CSNK1G3Q9Y6M4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CSNK1G3Q9Y6M4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
CSNK1G3Q9Y6M4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CSNK1G3Q9Y6M4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CSNK1G3Q9Y6M4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CSNK1G3Q9Y6M4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
CSNK1G3Q9Y6M4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CSNK1G3Q9Y6M4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CSNK1G3Q9Y6M4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CSNK1G3Q9Y6M4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
CSNK1G3Q9Y6M4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.9■■□□□ 1.26
CSNK1G3Q9Y6M4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.9■■□□□ 1.26
CSNK1G3Q9Y6M4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.9■■□□□ 1.26
CSNK1G3Q9Y6M4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.9■■□□□ 1.26
CSNK1G3Q9Y6M4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.9■■□□□ 1.26
CSNK1G3Q9Y6M4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
CSNK1G3Q9Y6M4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CSNK1G3Q9Y6M4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CSNK1G3Q9Y6M4 AC096887.2-201ENST00000623443 1957 ntBASIC22.89■■□□□ 1.26
CSNK1G3Q9Y6M4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CSNK1G3Q9Y6M4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
CSNK1G3Q9Y6M4 MIR638-201ENST00000385237 100 ntBASIC22.89■■□□□ 1.25
CSNK1G3Q9Y6M4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.89■■□□□ 1.25
CSNK1G3Q9Y6M4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CSNK1G3Q9Y6M4 MIR6722-201ENST00000617286 78 ntBASIC22.89■■□□□ 1.25
CSNK1G3Q9Y6M4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.89■■□□□ 1.25
CSNK1G3Q9Y6M4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CSNK1G3Q9Y6M4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CSNK1G3Q9Y6M4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.89■■□□□ 1.25
CSNK1G3Q9Y6M4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.89■■□□□ 1.25
CSNK1G3Q9Y6M4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
CSNK1G3Q9Y6M4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CSNK1G3Q9Y6M4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.88■■□□□ 1.25
CSNK1G3Q9Y6M4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CSNK1G3Q9Y6M4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
CSNK1G3Q9Y6M4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.88■■□□□ 1.25
CSNK1G3Q9Y6M4 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.88■■□□□ 1.25
CSNK1G3Q9Y6M4 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.88■■□□□ 1.25
CSNK1G3Q9Y6M4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.88■■□□□ 1.25
CSNK1G3Q9Y6M4 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.88■■□□□ 1.25
CSNK1G3Q9Y6M4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.88■■□□□ 1.25
CSNK1G3Q9Y6M4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.88■■□□□ 1.25
CSNK1G3Q9Y6M4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.88■■□□□ 1.25
CSNK1G3Q9Y6M4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CSNK1G3Q9Y6M4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CSNK1G3Q9Y6M4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CSNK1G3Q9Y6M4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
CSNK1G3Q9Y6M4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.87■■□□□ 1.25
CSNK1G3Q9Y6M4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.87■■□□□ 1.25
CSNK1G3Q9Y6M4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.87■■□□□ 1.25
CSNK1G3Q9Y6M4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
CSNK1G3Q9Y6M4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
CSNK1G3Q9Y6M4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CSNK1G3Q9Y6M4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CSNK1G3Q9Y6M4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CSNK1G3Q9Y6M4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
CSNK1G3Q9Y6M4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.86■■□□□ 1.25
CSNK1G3Q9Y6M4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.86■■□□□ 1.25
CSNK1G3Q9Y6M4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CSNK1G3Q9Y6M4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.86■■□□□ 1.25
CSNK1G3Q9Y6M4 SNX5-217ENST00000606557 1087 ntBASIC22.86■■□□□ 1.25
CSNK1G3Q9Y6M4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CSNK1G3Q9Y6M4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CSNK1G3Q9Y6M4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.85■■□□□ 1.25
CSNK1G3Q9Y6M4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.85■■□□□ 1.25
CSNK1G3Q9Y6M4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CSNK1G3Q9Y6M4 AC010501.1-201ENST00000606270 1962 ntBASIC22.85■■□□□ 1.25
CSNK1G3Q9Y6M4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
CSNK1G3Q9Y6M4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CSNK1G3Q9Y6M4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.85■■□□□ 1.25
CSNK1G3Q9Y6M4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CSNK1G3Q9Y6M4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CSNK1G3Q9Y6M4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.84■■□□□ 1.25
CSNK1G3Q9Y6M4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CSNK1G3Q9Y6M4 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.84■■□□□ 1.25
CSNK1G3Q9Y6M4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.84■■□□□ 1.25
CSNK1G3Q9Y6M4 AL512631.2-201ENST00000604634 923 ntBASIC22.84■■□□□ 1.25
CSNK1G3Q9Y6M4 MIR4466-201ENST00000606121 54 ntBASIC22.84■■□□□ 1.25
CSNK1G3Q9Y6M4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.84■■□□□ 1.25
CSNK1G3Q9Y6M4 ERN1-208ENST00000606895 2068 ntBASIC22.84■■□□□ 1.25
CSNK1G3Q9Y6M4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.84■■□□□ 1.25
CSNK1G3Q9Y6M4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.84■■□□□ 1.25
CSNK1G3Q9Y6M4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
CSNK1G3Q9Y6M4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
CSNK1G3Q9Y6M4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.83■■□□□ 1.25
CSNK1G3Q9Y6M4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.83■■□□□ 1.25
CSNK1G3Q9Y6M4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CSNK1G3Q9Y6M4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CSNK1G3Q9Y6M4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CSNK1G3Q9Y6M4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CSNK1G3Q9Y6M4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.81■■□□□ 1.24
CSNK1G3Q9Y6M4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CSNK1G3Q9Y6M4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CSNK1G3Q9Y6M4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CSNK1G3Q9Y6M4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.81■■□□□ 1.24
CSNK1G3Q9Y6M4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CSNK1G3Q9Y6M4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CSNK1G3Q9Y6M4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms