Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
NPC1L1Q9UHC9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC31.76■■■□□ 2.67
NPC1L1Q9UHC9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
NPC1L1Q9UHC9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
NPC1L1Q9UHC9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
NPC1L1Q9UHC9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC31.75■■■□□ 2.67
NPC1L1Q9UHC9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC31.75■■■□□ 2.67
NPC1L1Q9UHC9 Z92544.1-202ENST00000571933 1220 ntBASIC31.75■■■□□ 2.67
NPC1L1Q9UHC9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC31.75■■■□□ 2.67
NPC1L1Q9UHC9 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
NPC1L1Q9UHC9 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
NPC1L1Q9UHC9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC31.74■■■□□ 2.67
NPC1L1Q9UHC9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC31.74■■■□□ 2.67
NPC1L1Q9UHC9 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
NPC1L1Q9UHC9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC31.74■■■□□ 2.67
NPC1L1Q9UHC9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
NPC1L1Q9UHC9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
NPC1L1Q9UHC9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC31.73■■■□□ 2.67
NPC1L1Q9UHC9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
NPC1L1Q9UHC9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
NPC1L1Q9UHC9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
NPC1L1Q9UHC9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC31.72■■■□□ 2.67
NPC1L1Q9UHC9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC31.72■■■□□ 2.67
NPC1L1Q9UHC9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
NPC1L1Q9UHC9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
NPC1L1Q9UHC9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
NPC1L1Q9UHC9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC31.71■■■□□ 2.67
NPC1L1Q9UHC9 AC021242.3-201ENST00000607598 1377 ntBASIC31.71■■■□□ 2.67
NPC1L1Q9UHC9 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
NPC1L1Q9UHC9 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
NPC1L1Q9UHC9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
NPC1L1Q9UHC9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.71■■■□□ 2.67
NPC1L1Q9UHC9 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
NPC1L1Q9UHC9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.67
NPC1L1Q9UHC9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
NPC1L1Q9UHC9 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC31.7■■■□□ 2.67
NPC1L1Q9UHC9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
NPC1L1Q9UHC9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
NPC1L1Q9UHC9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC31.7■■■□□ 2.66
NPC1L1Q9UHC9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC31.69■■■□□ 2.66
NPC1L1Q9UHC9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC31.69■■■□□ 2.66
NPC1L1Q9UHC9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
NPC1L1Q9UHC9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
NPC1L1Q9UHC9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC31.69■■■□□ 2.66
NPC1L1Q9UHC9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
NPC1L1Q9UHC9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
NPC1L1Q9UHC9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
NPC1L1Q9UHC9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC31.68■■■□□ 2.66
NPC1L1Q9UHC9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC31.68■■■□□ 2.66
NPC1L1Q9UHC9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
NPC1L1Q9UHC9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC31.68■■■□□ 2.66
NPC1L1Q9UHC9 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
NPC1L1Q9UHC9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC31.68■■■□□ 2.66
NPC1L1Q9UHC9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC31.68■■■□□ 2.66
NPC1L1Q9UHC9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
NPC1L1Q9UHC9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC31.68■■■□□ 2.66
NPC1L1Q9UHC9 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
NPC1L1Q9UHC9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC31.68■■■□□ 2.66
NPC1L1Q9UHC9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
NPC1L1Q9UHC9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC31.68■■■□□ 2.66
NPC1L1Q9UHC9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
NPC1L1Q9UHC9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC31.67■■■□□ 2.66
NPC1L1Q9UHC9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC31.67■■■□□ 2.66
NPC1L1Q9UHC9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC31.67■■■□□ 2.66
NPC1L1Q9UHC9 EED-207ENST00000528180 1745 ntTSL 5 BASIC31.66■■■□□ 2.66
NPC1L1Q9UHC9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
NPC1L1Q9UHC9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
NPC1L1Q9UHC9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
NPC1L1Q9UHC9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC31.66■■■□□ 2.66
NPC1L1Q9UHC9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
NPC1L1Q9UHC9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
NPC1L1Q9UHC9 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC31.65■■■□□ 2.66
NPC1L1Q9UHC9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC31.65■■■□□ 2.66
NPC1L1Q9UHC9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
NPC1L1Q9UHC9 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
NPC1L1Q9UHC9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
NPC1L1Q9UHC9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
NPC1L1Q9UHC9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC31.64■■■□□ 2.66
NPC1L1Q9UHC9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC31.64■■■□□ 2.65
NPC1L1Q9UHC9 BX664725.1-201ENST00000438252 379 ntBASIC31.63■■■□□ 2.65
NPC1L1Q9UHC9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC31.63■■■□□ 2.65
NPC1L1Q9UHC9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC31.63■■■□□ 2.65
NPC1L1Q9UHC9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC31.63■■■□□ 2.65
NPC1L1Q9UHC9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC31.63■■■□□ 2.65
NPC1L1Q9UHC9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
NPC1L1Q9UHC9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
NPC1L1Q9UHC9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC31.62■■■□□ 2.65
NPC1L1Q9UHC9 LBH-205ENST00000407930 756 ntTSL 2 BASIC31.62■■■□□ 2.65
NPC1L1Q9UHC9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC31.62■■■□□ 2.65
NPC1L1Q9UHC9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
NPC1L1Q9UHC9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
NPC1L1Q9UHC9 HLA-L-211ENST00000482052 1765 ntBASIC31.61■■■□□ 2.65
NPC1L1Q9UHC9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
NPC1L1Q9UHC9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC31.61■■■□□ 2.65
NPC1L1Q9UHC9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
NPC1L1Q9UHC9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC31.61■■■□□ 2.65
NPC1L1Q9UHC9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
NPC1L1Q9UHC9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC31.6■■■□□ 2.65
NPC1L1Q9UHC9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
NPC1L1Q9UHC9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms