Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.23■■□□□ 1.63
NUCKS1Q9H1E3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
NUCKS1Q9H1E3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
NUCKS1Q9H1E3 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.23■■□□□ 1.63
NUCKS1Q9H1E3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
NUCKS1Q9H1E3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
NUCKS1Q9H1E3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
NUCKS1Q9H1E3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NUCKS1Q9H1E3 AC004812.2-201ENST00000611079 2094 ntBASIC25.22■■□□□ 1.63
NUCKS1Q9H1E3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
NUCKS1Q9H1E3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
NUCKS1Q9H1E3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NUCKS1Q9H1E3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.22■■□□□ 1.63
NUCKS1Q9H1E3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
NUCKS1Q9H1E3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
NUCKS1Q9H1E3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
NUCKS1Q9H1E3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
NUCKS1Q9H1E3 HLA-L-211ENST00000482052 1765 ntBASIC25.21■■□□□ 1.63
NUCKS1Q9H1E3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
NUCKS1Q9H1E3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
NUCKS1Q9H1E3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.21■■□□□ 1.63
NUCKS1Q9H1E3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
NUCKS1Q9H1E3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
NUCKS1Q9H1E3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
NUCKS1Q9H1E3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
NUCKS1Q9H1E3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.2■■□□□ 1.62
NUCKS1Q9H1E3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.19■■□□□ 1.62
NUCKS1Q9H1E3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NUCKS1Q9H1E3 AC012354.3-201ENST00000623734 483 ntBASIC25.19■■□□□ 1.62
NUCKS1Q9H1E3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NUCKS1Q9H1E3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NUCKS1Q9H1E3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
NUCKS1Q9H1E3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
NUCKS1Q9H1E3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
NUCKS1Q9H1E3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
NUCKS1Q9H1E3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.18■■□□□ 1.62
NUCKS1Q9H1E3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
NUCKS1Q9H1E3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
NUCKS1Q9H1E3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
NUCKS1Q9H1E3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
NUCKS1Q9H1E3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.18■■□□□ 1.62
NUCKS1Q9H1E3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
NUCKS1Q9H1E3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
NUCKS1Q9H1E3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.18■■□□□ 1.62
NUCKS1Q9H1E3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
NUCKS1Q9H1E3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
NUCKS1Q9H1E3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
NUCKS1Q9H1E3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.17■■□□□ 1.62
NUCKS1Q9H1E3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
NUCKS1Q9H1E3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
NUCKS1Q9H1E3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
NUCKS1Q9H1E3 AC129492.7-201ENST00000622992 756 ntBASIC25.17■■□□□ 1.62
NUCKS1Q9H1E3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
NUCKS1Q9H1E3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.17■■□□□ 1.62
NUCKS1Q9H1E3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
NUCKS1Q9H1E3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
NUCKS1Q9H1E3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
NUCKS1Q9H1E3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
NUCKS1Q9H1E3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
NUCKS1Q9H1E3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.16■■□□□ 1.62
NUCKS1Q9H1E3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
NUCKS1Q9H1E3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
NUCKS1Q9H1E3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NUCKS1Q9H1E3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
NUCKS1Q9H1E3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NUCKS1Q9H1E3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.15■■□□□ 1.62
NUCKS1Q9H1E3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
NUCKS1Q9H1E3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NUCKS1Q9H1E3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.15■■□□□ 1.62
NUCKS1Q9H1E3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
NUCKS1Q9H1E3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.15■■□□□ 1.62
NUCKS1Q9H1E3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
NUCKS1Q9H1E3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
NUCKS1Q9H1E3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NUCKS1Q9H1E3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NUCKS1Q9H1E3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
NUCKS1Q9H1E3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
NUCKS1Q9H1E3 AC004987.1-201ENST00000428627 508 ntBASIC25.14■■□□□ 1.62
NUCKS1Q9H1E3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.14■■□□□ 1.61
NUCKS1Q9H1E3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
NUCKS1Q9H1E3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NUCKS1Q9H1E3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
NUCKS1Q9H1E3 SPCS2P3-201ENST00000500401 656 ntBASIC25.13■■□□□ 1.61
NUCKS1Q9H1E3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NUCKS1Q9H1E3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NUCKS1Q9H1E3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
NUCKS1Q9H1E3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
NUCKS1Q9H1E3 ATP5G2P3-201ENST00000429083 425 ntBASIC25.12■■□□□ 1.61
NUCKS1Q9H1E3 AL033527.3-201ENST00000566366 1196 ntBASIC25.12■■□□□ 1.61
NUCKS1Q9H1E3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.12■■□□□ 1.61
NUCKS1Q9H1E3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
NUCKS1Q9H1E3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
NUCKS1Q9H1E3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NUCKS1Q9H1E3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NUCKS1Q9H1E3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
NUCKS1Q9H1E3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
NUCKS1Q9H1E3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
NUCKS1Q9H1E3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.11■■□□□ 1.61
NUCKS1Q9H1E3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
NUCKS1Q9H1E3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms