Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
FOXN4Q96NZ1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FOXN4Q96NZ1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.82■□□□□ 0.92
FOXN4Q96NZ1 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.82■□□□□ 0.92
FOXN4Q96NZ1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
FOXN4Q96NZ1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FOXN4Q96NZ1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
FOXN4Q96NZ1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
FOXN4Q96NZ1 DUX4L9-201ENST00000449051 1259 ntBASIC20.81■□□□□ 0.92
FOXN4Q96NZ1 AC018755.3-202ENST00000596210 929 ntBASIC20.81■□□□□ 0.92
FOXN4Q96NZ1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
FOXN4Q96NZ1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FOXN4Q96NZ1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXN4Q96NZ1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FOXN4Q96NZ1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXN4Q96NZ1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
FOXN4Q96NZ1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXN4Q96NZ1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXN4Q96NZ1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXN4Q96NZ1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXN4Q96NZ1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
FOXN4Q96NZ1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FOXN4Q96NZ1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
FOXN4Q96NZ1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
FOXN4Q96NZ1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
FOXN4Q96NZ1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FOXN4Q96NZ1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.79■□□□□ 0.92
FOXN4Q96NZ1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.79■□□□□ 0.92
FOXN4Q96NZ1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.79■□□□□ 0.92
FOXN4Q96NZ1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.79■□□□□ 0.92
FOXN4Q96NZ1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXN4Q96NZ1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FOXN4Q96NZ1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
FOXN4Q96NZ1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
FOXN4Q96NZ1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FOXN4Q96NZ1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.78■□□□□ 0.92
FOXN4Q96NZ1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FOXN4Q96NZ1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
FOXN4Q96NZ1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXN4Q96NZ1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXN4Q96NZ1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXN4Q96NZ1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.77■□□□□ 0.92
FOXN4Q96NZ1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXN4Q96NZ1 RPS2P7-201ENST00000447334 885 ntBASIC20.77■□□□□ 0.92
FOXN4Q96NZ1 RARRES2P1-201ENST00000474487 481 ntBASIC20.77■□□□□ 0.92
FOXN4Q96NZ1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.77■□□□□ 0.92
FOXN4Q96NZ1 MIR6089-201ENST00000616698 64 ntBASIC20.77■□□□□ 0.92
FOXN4Q96NZ1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXN4Q96NZ1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXN4Q96NZ1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXN4Q96NZ1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
FOXN4Q96NZ1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.77■□□□□ 0.92
FOXN4Q96NZ1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN4Q96NZ1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
FOXN4Q96NZ1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN4Q96NZ1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.76■□□□□ 0.91
FOXN4Q96NZ1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.76■□□□□ 0.91
FOXN4Q96NZ1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN4Q96NZ1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN4Q96NZ1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
FOXN4Q96NZ1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.76■□□□□ 0.91
FOXN4Q96NZ1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN4Q96NZ1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN4Q96NZ1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN4Q96NZ1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN4Q96NZ1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN4Q96NZ1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.76■□□□□ 0.91
FOXN4Q96NZ1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN4Q96NZ1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN4Q96NZ1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN4Q96NZ1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN4Q96NZ1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN4Q96NZ1 KRT18P10-201ENST00000388836 1287 ntBASIC20.75■□□□□ 0.91
FOXN4Q96NZ1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN4Q96NZ1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.75■□□□□ 0.91
FOXN4Q96NZ1 MIR6765-201ENST00000614092 87 ntBASIC20.75■□□□□ 0.91
FOXN4Q96NZ1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN4Q96NZ1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN4Q96NZ1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN4Q96NZ1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN4Q96NZ1 HLA-L-211ENST00000482052 1765 ntBASIC20.74■□□□□ 0.91
FOXN4Q96NZ1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN4Q96NZ1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN4Q96NZ1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN4Q96NZ1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN4Q96NZ1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
FOXN4Q96NZ1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
FOXN4Q96NZ1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN4Q96NZ1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
FOXN4Q96NZ1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN4Q96NZ1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN4Q96NZ1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
FOXN4Q96NZ1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.74■□□□□ 0.91
FOXN4Q96NZ1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN4Q96NZ1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN4Q96NZ1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.74■□□□□ 0.91
FOXN4Q96NZ1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.74■□□□□ 0.91
FOXN4Q96NZ1 LINC00543-201ENST00000567234 1845 ntBASIC20.74■□□□□ 0.91
FOXN4Q96NZ1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXN4Q96NZ1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms