Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
CALR3Q96L12 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.66■■□□□ 1.54
CALR3Q96L12 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
CALR3Q96L12 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CALR3Q96L12 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.65■■□□□ 1.54
CALR3Q96L12 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.65■■□□□ 1.54
CALR3Q96L12 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CALR3Q96L12 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CALR3Q96L12 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CALR3Q96L12 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
CALR3Q96L12 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
CALR3Q96L12 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.54
CALR3Q96L12 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CALR3Q96L12 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.64■■□□□ 1.54
CALR3Q96L12 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.64■■□□□ 1.53
CALR3Q96L12 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.63■■□□□ 1.53
CALR3Q96L12 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.63■■□□□ 1.53
CALR3Q96L12 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CALR3Q96L12 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CALR3Q96L12 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.63■■□□□ 1.53
CALR3Q96L12 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
CALR3Q96L12 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CALR3Q96L12 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
CALR3Q96L12 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
CALR3Q96L12 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
CALR3Q96L12 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CALR3Q96L12 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CALR3Q96L12 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.62■■□□□ 1.53
CALR3Q96L12 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
CALR3Q96L12 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
CALR3Q96L12 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CALR3Q96L12 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.62■■□□□ 1.53
CALR3Q96L12 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CALR3Q96L12 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CALR3Q96L12 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.62■■□□□ 1.53
CALR3Q96L12 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CALR3Q96L12 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CALR3Q96L12 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.61■■□□□ 1.53
CALR3Q96L12 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.61■■□□□ 1.53
CALR3Q96L12 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
CALR3Q96L12 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CALR3Q96L12 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CALR3Q96L12 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CALR3Q96L12 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.61■■□□□ 1.53
CALR3Q96L12 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC24.61■■□□□ 1.53
CALR3Q96L12 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.61■■□□□ 1.53
CALR3Q96L12 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CALR3Q96L12 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
CALR3Q96L12 DUSP8P5-201ENST00000422884 1815 ntBASIC24.6■■□□□ 1.53
CALR3Q96L12 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CALR3Q96L12 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CALR3Q96L12 MIR4449-201ENST00000578365 66 ntBASIC24.59■■□□□ 1.53
CALR3Q96L12 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CALR3Q96L12 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
CALR3Q96L12 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.59■■□□□ 1.53
CALR3Q96L12 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
CALR3Q96L12 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CALR3Q96L12 GPX1-201ENST00000419349 1106 ntBASIC24.58■■□□□ 1.53
CALR3Q96L12 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CALR3Q96L12 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CALR3Q96L12 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CALR3Q96L12 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
CALR3Q96L12 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CALR3Q96L12 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CALR3Q96L12 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
CALR3Q96L12 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC24.57■■□□□ 1.52
CALR3Q96L12 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
CALR3Q96L12 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CALR3Q96L12 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.57■■□□□ 1.52
CALR3Q96L12 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
CALR3Q96L12 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CALR3Q96L12 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CALR3Q96L12 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.56■■□□□ 1.52
CALR3Q96L12 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CALR3Q96L12 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CALR3Q96L12 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.56■■□□□ 1.52
CALR3Q96L12 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
CALR3Q96L12 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CALR3Q96L12 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
CALR3Q96L12 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CALR3Q96L12 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
CALR3Q96L12 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.55■■□□□ 1.52
CALR3Q96L12 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
CALR3Q96L12 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CALR3Q96L12 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.55■■□□□ 1.52
CALR3Q96L12 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.54■■□□□ 1.52
CALR3Q96L12 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
CALR3Q96L12 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CALR3Q96L12 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.54■■□□□ 1.52
CALR3Q96L12 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CALR3Q96L12 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.54■■□□□ 1.52
CALR3Q96L12 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
CALR3Q96L12 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CALR3Q96L12 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
CALR3Q96L12 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CALR3Q96L12 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CALR3Q96L12 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CALR3Q96L12 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CALR3Q96L12 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CALR3Q96L12 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms