Protein–RNA interactions for Protein: Q8NE00

TMEM104, Transmembrane protein 104, humanhuman

Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM104Q8NE00 AC022413.1-201ENST00000624602 984 ntBASIC19.96■□□□□ 0.79
TMEM104Q8NE00 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM104Q8NE00 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.96■□□□□ 0.79
TMEM104Q8NE00 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEM104Q8NE00 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TMEM104Q8NE00 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.96■□□□□ 0.79
TMEM104Q8NE00 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM104Q8NE00 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TMEM104Q8NE00 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
TMEM104Q8NE00 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
TMEM104Q8NE00 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TMEM104Q8NE00 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM104Q8NE00 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM104Q8NE00 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TMEM104Q8NE00 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM104Q8NE00 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.95■□□□□ 0.78
TMEM104Q8NE00 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM104Q8NE00 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM104Q8NE00 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM104Q8NE00 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM104Q8NE00 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM104Q8NE00 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.94■□□□□ 0.78
TMEM104Q8NE00 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.94■□□□□ 0.78
TMEM104Q8NE00 AC068473.5-201ENST00000616428 2072 ntBASIC19.94■□□□□ 0.78
TMEM104Q8NE00 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.94■□□□□ 0.78
TMEM104Q8NE00 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.94■□□□□ 0.78
TMEM104Q8NE00 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.94■□□□□ 0.78
TMEM104Q8NE00 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.94■□□□□ 0.78
TMEM104Q8NE00 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM104Q8NE00 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM104Q8NE00 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM104Q8NE00 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TMEM104Q8NE00 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.93■□□□□ 0.78
TMEM104Q8NE00 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM104Q8NE00 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TMEM104Q8NE00 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM104Q8NE00 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM104Q8NE00 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
TMEM104Q8NE00 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.93■□□□□ 0.78
TMEM104Q8NE00 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM104Q8NE00 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM104Q8NE00 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.93■□□□□ 0.78
TMEM104Q8NE00 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM104Q8NE00 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM104Q8NE00 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TMEM104Q8NE00 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM104Q8NE00 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TMEM104Q8NE00 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.92■□□□□ 0.78
TMEM104Q8NE00 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
TMEM104Q8NE00 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.92■□□□□ 0.78
TMEM104Q8NE00 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM104Q8NE00 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM104Q8NE00 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM104Q8NE00 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM104Q8NE00 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM104Q8NE00 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TMEM104Q8NE00 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM104Q8NE00 AC007029.1-201ENST00000604183 313 ntBASIC19.91■□□□□ 0.78
TMEM104Q8NE00 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM104Q8NE00 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TMEM104Q8NE00 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM104Q8NE00 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TMEM104Q8NE00 AC012676.1-201ENST00000574705 1949 ntBASIC19.9■□□□□ 0.78
TMEM104Q8NE00 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.9■□□□□ 0.78
TMEM104Q8NE00 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TMEM104Q8NE00 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM104Q8NE00 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM104Q8NE00 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM104Q8NE00 DUSP8P5-201ENST00000422884 1815 ntBASIC19.9■□□□□ 0.78
TMEM104Q8NE00 FOXO3B-201ENST00000395675 1928 ntBASIC19.9■□□□□ 0.78
TMEM104Q8NE00 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM104Q8NE00 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM104Q8NE00 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM104Q8NE00 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM104Q8NE00 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.89■□□□□ 0.77
TMEM104Q8NE00 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.89■□□□□ 0.77
TMEM104Q8NE00 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TMEM104Q8NE00 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM104Q8NE00 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM104Q8NE00 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM104Q8NE00 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM104Q8NE00 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TMEM104Q8NE00 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TMEM104Q8NE00 RAP2CP1-202ENST00000605179 643 ntBASIC19.88■□□□□ 0.77
TMEM104Q8NE00 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM104Q8NE00 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TMEM104Q8NE00 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TMEM104Q8NE00 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM104Q8NE00 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM104Q8NE00 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TMEM104Q8NE00 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM104Q8NE00 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM104Q8NE00 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM104Q8NE00 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM104Q8NE00 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.87■□□□□ 0.77
TMEM104Q8NE00 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TMEM104Q8NE00 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM104Q8NE00 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM104Q8NE00 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM104Q8NE00 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms