Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RETREG2Q8NC44 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
RETREG2Q8NC44 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
RETREG2Q8NC44 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
RETREG2Q8NC44 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RETREG2Q8NC44 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
RETREG2Q8NC44 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
RETREG2Q8NC44 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.43■■□□□ 1.82
RETREG2Q8NC44 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RETREG2Q8NC44 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.43■■□□□ 1.82
RETREG2Q8NC44 AC092028.1-203ENST00000608262 953 ntBASIC26.43■■□□□ 1.82
RETREG2Q8NC44 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
RETREG2Q8NC44 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.43■■□□□ 1.82
RETREG2Q8NC44 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RETREG2Q8NC44 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RETREG2Q8NC44 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RETREG2Q8NC44 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RETREG2Q8NC44 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.42■■□□□ 1.82
RETREG2Q8NC44 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RETREG2Q8NC44 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.41■■□□□ 1.82
RETREG2Q8NC44 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RETREG2Q8NC44 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RETREG2Q8NC44 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.4■■□□□ 1.82
RETREG2Q8NC44 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RETREG2Q8NC44 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
RETREG2Q8NC44 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.4■■□□□ 1.82
RETREG2Q8NC44 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.4■■□□□ 1.82
RETREG2Q8NC44 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.39■■□□□ 1.82
RETREG2Q8NC44 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RETREG2Q8NC44 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
RETREG2Q8NC44 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
RETREG2Q8NC44 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
RETREG2Q8NC44 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.39■■□□□ 1.82
RETREG2Q8NC44 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RETREG2Q8NC44 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.39■■□□□ 1.81
RETREG2Q8NC44 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RETREG2Q8NC44 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RETREG2Q8NC44 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
RETREG2Q8NC44 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.38■■□□□ 1.81
RETREG2Q8NC44 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.38■■□□□ 1.81
RETREG2Q8NC44 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.38■■□□□ 1.81
RETREG2Q8NC44 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
RETREG2Q8NC44 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.38■■□□□ 1.81
RETREG2Q8NC44 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
RETREG2Q8NC44 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
RETREG2Q8NC44 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
RETREG2Q8NC44 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.37■■□□□ 1.81
RETREG2Q8NC44 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.37■■□□□ 1.81
RETREG2Q8NC44 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RETREG2Q8NC44 MIR638-201ENST00000385237 100 ntBASIC26.37■■□□□ 1.81
RETREG2Q8NC44 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.37■■□□□ 1.81
RETREG2Q8NC44 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.37■■□□□ 1.81
RETREG2Q8NC44 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.37■■□□□ 1.81
RETREG2Q8NC44 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RETREG2Q8NC44 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.37■■□□□ 1.81
RETREG2Q8NC44 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
RETREG2Q8NC44 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RETREG2Q8NC44 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
RETREG2Q8NC44 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RETREG2Q8NC44 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.36■■□□□ 1.81
RETREG2Q8NC44 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.36■■□□□ 1.81
RETREG2Q8NC44 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.36■■□□□ 1.81
RETREG2Q8NC44 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.36■■□□□ 1.81
RETREG2Q8NC44 AL139246.5-201ENST00000606645 996 ntBASIC26.36■■□□□ 1.81
RETREG2Q8NC44 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RETREG2Q8NC44 AC093323.1-202ENST00000635031 2045 ntBASIC26.36■■□□□ 1.81
RETREG2Q8NC44 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RETREG2Q8NC44 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
RETREG2Q8NC44 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RETREG2Q8NC44 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.35■■□□□ 1.81
RETREG2Q8NC44 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RETREG2Q8NC44 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RETREG2Q8NC44 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.35■■□□□ 1.81
RETREG2Q8NC44 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.35■■□□□ 1.81
RETREG2Q8NC44 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RETREG2Q8NC44 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RETREG2Q8NC44 AC142381.3-201ENST00000568208 1670 ntBASIC26.34■■□□□ 1.81
RETREG2Q8NC44 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RETREG2Q8NC44 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.34■■□□□ 1.81
RETREG2Q8NC44 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
RETREG2Q8NC44 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
RETREG2Q8NC44 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RETREG2Q8NC44 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RETREG2Q8NC44 MIR4281-201ENST00000580852 62 ntBASIC26.34■■□□□ 1.81
RETREG2Q8NC44 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.34■■□□□ 1.81
RETREG2Q8NC44 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RETREG2Q8NC44 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RETREG2Q8NC44 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RETREG2Q8NC44 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
RETREG2Q8NC44 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.33■■□□□ 1.81
RETREG2Q8NC44 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.33■■□□□ 1.81
RETREG2Q8NC44 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.33■■□□□ 1.8
RETREG2Q8NC44 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
RETREG2Q8NC44 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.33■■□□□ 1.8
RETREG2Q8NC44 AC010997.5-201ENST00000609182 354 ntBASIC26.32■■□□□ 1.8
RETREG2Q8NC44 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.32■■□□□ 1.8
RETREG2Q8NC44 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RETREG2Q8NC44 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
RETREG2Q8NC44 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.31■■□□□ 1.8
RETREG2Q8NC44 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms