Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.77■■□□□ 1.24
CPSF7Q8N684 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.77■■□□□ 1.24
CPSF7Q8N684 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CPSF7Q8N684 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CPSF7Q8N684 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.76■■□□□ 1.23
CPSF7Q8N684 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
CPSF7Q8N684 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CPSF7Q8N684 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CPSF7Q8N684 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CPSF7Q8N684 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
CPSF7Q8N684 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CPSF7Q8N684 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
CPSF7Q8N684 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CPSF7Q8N684 AC079834.2-201ENST00000609776 1949 ntBASIC22.75■■□□□ 1.23
CPSF7Q8N684 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.75■■□□□ 1.23
CPSF7Q8N684 MIR6089-201ENST00000616698 64 ntBASIC22.75■■□□□ 1.23
CPSF7Q8N684 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CPSF7Q8N684 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.75■■□□□ 1.23
CPSF7Q8N684 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.75■■□□□ 1.23
CPSF7Q8N684 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.74■■□□□ 1.23
CPSF7Q8N684 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CPSF7Q8N684 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.74■■□□□ 1.23
CPSF7Q8N684 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
CPSF7Q8N684 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
CPSF7Q8N684 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
CPSF7Q8N684 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
CPSF7Q8N684 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CPSF7Q8N684 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
CPSF7Q8N684 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.73■■□□□ 1.23
CPSF7Q8N684 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CPSF7Q8N684 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.73■■□□□ 1.23
CPSF7Q8N684 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.72■■□□□ 1.23
CPSF7Q8N684 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CPSF7Q8N684 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CPSF7Q8N684 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
CPSF7Q8N684 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
CPSF7Q8N684 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CPSF7Q8N684 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CPSF7Q8N684 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CPSF7Q8N684 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CPSF7Q8N684 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CPSF7Q8N684 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CPSF7Q8N684 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CPSF7Q8N684 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
CPSF7Q8N684 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
CPSF7Q8N684 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
CPSF7Q8N684 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CPSF7Q8N684 AL033527.3-201ENST00000566366 1196 ntBASIC22.7■■□□□ 1.22
CPSF7Q8N684 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.7■■□□□ 1.22
CPSF7Q8N684 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CPSF7Q8N684 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.7■■□□□ 1.22
CPSF7Q8N684 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CPSF7Q8N684 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
CPSF7Q8N684 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.7■■□□□ 1.22
CPSF7Q8N684 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CPSF7Q8N684 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.69■■□□□ 1.22
CPSF7Q8N684 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.69■■□□□ 1.22
CPSF7Q8N684 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CPSF7Q8N684 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CPSF7Q8N684 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CPSF7Q8N684 KRT18P60-201ENST00000312876 1297 ntBASIC22.69■■□□□ 1.22
CPSF7Q8N684 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CPSF7Q8N684 AC007029.1-201ENST00000604183 313 ntBASIC22.69■■□□□ 1.22
CPSF7Q8N684 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CPSF7Q8N684 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.68■■□□□ 1.22
CPSF7Q8N684 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CPSF7Q8N684 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CPSF7Q8N684 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CPSF7Q8N684 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CPSF7Q8N684 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CPSF7Q8N684 SMPD5-203ENST00000639008 1464 ntBASIC22.67■■□□□ 1.22
CPSF7Q8N684 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CPSF7Q8N684 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CPSF7Q8N684 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.67■■□□□ 1.22
CPSF7Q8N684 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.67■■□□□ 1.22
CPSF7Q8N684 ABCB10P4-201ENST00000566803 2184 ntBASIC22.67■■□□□ 1.22
CPSF7Q8N684 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CPSF7Q8N684 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CPSF7Q8N684 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.66■■□□□ 1.22
CPSF7Q8N684 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.66■■□□□ 1.22
CPSF7Q8N684 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CPSF7Q8N684 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.66■■□□□ 1.22
CPSF7Q8N684 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.66■■□□□ 1.22
CPSF7Q8N684 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CPSF7Q8N684 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CPSF7Q8N684 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CPSF7Q8N684 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.64■■□□□ 1.22
CPSF7Q8N684 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.64■■□□□ 1.22
CPSF7Q8N684 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CPSF7Q8N684 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.64■■□□□ 1.21
CPSF7Q8N684 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.64■■□□□ 1.21
CPSF7Q8N684 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CPSF7Q8N684 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CPSF7Q8N684 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CPSF7Q8N684 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CPSF7Q8N684 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CPSF7Q8N684 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CPSF7Q8N684 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CPSF7Q8N684 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CPSF7Q8N684 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms