Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 HLA-L-211ENST00000482052 1765 ntBASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01561Q8N1V8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
LINC01561Q8N1V8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01561Q8N1V8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC15.63■□□□□ 0.09
LINC01561Q8N1V8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01561Q8N1V8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01561Q8N1V8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01561Q8N1V8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LINC01561Q8N1V8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01561Q8N1V8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC15.63■□□□□ 0.09
LINC01561Q8N1V8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC15.63■□□□□ 0.09
LINC01561Q8N1V8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LINC01561Q8N1V8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
LINC01561Q8N1V8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
LINC01561Q8N1V8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01561Q8N1V8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
LINC01561Q8N1V8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01561Q8N1V8 CLDN5-201ENST00000403084 2357 ntBASIC15.62■□□□□ 0.09
LINC01561Q8N1V8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC01561Q8N1V8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC15.62■□□□□ 0.09
LINC01561Q8N1V8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01561Q8N1V8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01561Q8N1V8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
LINC01561Q8N1V8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01561Q8N1V8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC15.62■□□□□ 0.09
LINC01561Q8N1V8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01561Q8N1V8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
LINC01561Q8N1V8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
LINC01561Q8N1V8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01561Q8N1V8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01561Q8N1V8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01561Q8N1V8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01561Q8N1V8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC01561Q8N1V8 FOXO3B-201ENST00000395675 1928 ntBASIC15.61■□□□□ 0.09
LINC01561Q8N1V8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
LINC01561Q8N1V8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
LINC01561Q8N1V8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01561Q8N1V8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC01561Q8N1V8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC15.61■□□□□ 0.09
LINC01561Q8N1V8 GFER-205ENST00000569451 517 ntTSL 5 BASIC15.61■□□□□ 0.09
LINC01561Q8N1V8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01561Q8N1V8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01561Q8N1V8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01561Q8N1V8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01561Q8N1V8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC15.61■□□□□ 0.09
LINC01561Q8N1V8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC15.61■□□□□ 0.09
LINC01561Q8N1V8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01561Q8N1V8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC15.6■□□□□ 0.09
LINC01561Q8N1V8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
LINC01561Q8N1V8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
LINC01561Q8N1V8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01561Q8N1V8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01561Q8N1V8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC15.6■□□□□ 0.09
LINC01561Q8N1V8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01561Q8N1V8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LINC01561Q8N1V8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01561Q8N1V8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01561Q8N1V8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01561Q8N1V8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01561Q8N1V8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01561Q8N1V8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01561Q8N1V8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01561Q8N1V8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01561Q8N1V8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
LINC01561Q8N1V8 AC093536.1-201ENST00000569153 554 ntBASIC15.59■□□□□ 0.09
LINC01561Q8N1V8 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01561Q8N1V8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01561Q8N1V8 AL161729.1-201ENST00000604104 1402 ntBASIC15.59■□□□□ 0.09
LINC01561Q8N1V8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
LINC01561Q8N1V8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01561Q8N1V8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01561Q8N1V8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC15.58■□□□□ 0.08
LINC01561Q8N1V8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01561Q8N1V8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01561Q8N1V8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01561Q8N1V8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC15.58■□□□□ 0.08
LINC01561Q8N1V8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01561Q8N1V8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01561Q8N1V8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01561Q8N1V8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01561Q8N1V8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01561Q8N1V8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LINC01561Q8N1V8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01561Q8N1V8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC15.57■□□□□ 0.08
LINC01561Q8N1V8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01561Q8N1V8 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01561Q8N1V8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01561Q8N1V8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01561Q8N1V8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01561Q8N1V8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01561Q8N1V8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC15.56■□□□□ 0.08
LINC01561Q8N1V8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01561Q8N1V8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01561Q8N1V8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01561Q8N1V8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms