Protein–RNA interactions for Protein: Q6PDB4

ZNF880, Zinc finger protein 880, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF880Q6PDB4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF880Q6PDB4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF880Q6PDB4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ZNF880Q6PDB4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF880Q6PDB4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF880Q6PDB4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF880Q6PDB4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF880Q6PDB4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF880Q6PDB4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNF880Q6PDB4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF880Q6PDB4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNF880Q6PDB4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.46■□□□□ 0.71
ZNF880Q6PDB4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF880Q6PDB4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ZNF880Q6PDB4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.46■□□□□ 0.71
ZNF880Q6PDB4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF880Q6PDB4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
ZNF880Q6PDB4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
ZNF880Q6PDB4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF880Q6PDB4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF880Q6PDB4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF880Q6PDB4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF880Q6PDB4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF880Q6PDB4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ZNF880Q6PDB4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF880Q6PDB4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF880Q6PDB4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF880Q6PDB4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF880Q6PDB4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ZNF880Q6PDB4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF880Q6PDB4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF880Q6PDB4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF880Q6PDB4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ZNF880Q6PDB4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ZNF880Q6PDB4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF880Q6PDB4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF880Q6PDB4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF880Q6PDB4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.45■□□□□ 0.7
ZNF880Q6PDB4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF880Q6PDB4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF880Q6PDB4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF880Q6PDB4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.44■□□□□ 0.7
ZNF880Q6PDB4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF880Q6PDB4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF880Q6PDB4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ZNF880Q6PDB4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF880Q6PDB4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF880Q6PDB4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF880Q6PDB4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF880Q6PDB4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF880Q6PDB4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF880Q6PDB4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ZNF880Q6PDB4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF880Q6PDB4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF880Q6PDB4 AC133552.2-201ENST00000619106 1032 ntBASIC19.43■□□□□ 0.7
ZNF880Q6PDB4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF880Q6PDB4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.43■□□□□ 0.7
ZNF880Q6PDB4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF880Q6PDB4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF880Q6PDB4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF880Q6PDB4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF880Q6PDB4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF880Q6PDB4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ZNF880Q6PDB4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF880Q6PDB4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
ZNF880Q6PDB4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF880Q6PDB4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ZNF880Q6PDB4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF880Q6PDB4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ZNF880Q6PDB4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF880Q6PDB4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF880Q6PDB4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.41■□□□□ 0.7
ZNF880Q6PDB4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ZNF880Q6PDB4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF880Q6PDB4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF880Q6PDB4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF880Q6PDB4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF880Q6PDB4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
ZNF880Q6PDB4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF880Q6PDB4 RNF126P1-201ENST00000567452 1320 ntBASIC19.41■□□□□ 0.7
ZNF880Q6PDB4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF880Q6PDB4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF880Q6PDB4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF880Q6PDB4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF880Q6PDB4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF880Q6PDB4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF880Q6PDB4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ZNF880Q6PDB4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF880Q6PDB4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ZNF880Q6PDB4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF880Q6PDB4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF880Q6PDB4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
ZNF880Q6PDB4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.39■□□□□ 0.7
ZNF880Q6PDB4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF880Q6PDB4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ZNF880Q6PDB4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF880Q6PDB4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.39■□□□□ 0.69
ZNF880Q6PDB4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF880Q6PDB4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF880Q6PDB4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms