Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SNX30Q5VWJ9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.56■■□□□ 1.52
SNX30Q5VWJ9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.56■■□□□ 1.52
SNX30Q5VWJ9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.56■■□□□ 1.52
SNX30Q5VWJ9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.56■■□□□ 1.52
SNX30Q5VWJ9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
SNX30Q5VWJ9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SNX30Q5VWJ9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.56■■□□□ 1.52
SNX30Q5VWJ9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNX30Q5VWJ9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.55■■□□□ 1.52
SNX30Q5VWJ9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.55■■□□□ 1.52
SNX30Q5VWJ9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.55■■□□□ 1.52
SNX30Q5VWJ9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
SNX30Q5VWJ9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNX30Q5VWJ9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SNX30Q5VWJ9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.55■■□□□ 1.52
SNX30Q5VWJ9 AC090877.2-201ENST00000558441 1738 ntBASIC24.55■■□□□ 1.52
SNX30Q5VWJ9 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNX30Q5VWJ9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SNX30Q5VWJ9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.54■■□□□ 1.52
SNX30Q5VWJ9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SNX30Q5VWJ9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.54■■□□□ 1.52
SNX30Q5VWJ9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.54■■□□□ 1.52
SNX30Q5VWJ9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.54■■□□□ 1.52
SNX30Q5VWJ9 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SNX30Q5VWJ9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SNX30Q5VWJ9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SNX30Q5VWJ9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.53■■□□□ 1.52
SNX30Q5VWJ9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNX30Q5VWJ9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNX30Q5VWJ9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNX30Q5VWJ9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNX30Q5VWJ9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.53■■□□□ 1.52
SNX30Q5VWJ9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.52■■□□□ 1.52
SNX30Q5VWJ9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
SNX30Q5VWJ9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
SNX30Q5VWJ9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SNX30Q5VWJ9 AL356441.2-201ENST00000443009 864 ntBASIC24.51■■□□□ 1.51
SNX30Q5VWJ9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.51■■□□□ 1.51
SNX30Q5VWJ9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.51■■□□□ 1.51
SNX30Q5VWJ9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
SNX30Q5VWJ9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
SNX30Q5VWJ9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SNX30Q5VWJ9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SNX30Q5VWJ9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
SNX30Q5VWJ9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SNX30Q5VWJ9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.5■■□□□ 1.51
SNX30Q5VWJ9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
SNX30Q5VWJ9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.5■■□□□ 1.51
SNX30Q5VWJ9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
SNX30Q5VWJ9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.5■■□□□ 1.51
SNX30Q5VWJ9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SNX30Q5VWJ9 AF131216.4-201ENST00000638924 1588 ntBASIC24.5■■□□□ 1.51
SNX30Q5VWJ9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
SNX30Q5VWJ9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.49■■□□□ 1.51
SNX30Q5VWJ9 AC092028.1-203ENST00000608262 953 ntBASIC24.49■■□□□ 1.51
SNX30Q5VWJ9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SNX30Q5VWJ9 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SNX30Q5VWJ9 AC020928.2-201ENST00000588717 2197 ntBASIC24.49■■□□□ 1.51
SNX30Q5VWJ9 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.48■■□□□ 1.51
SNX30Q5VWJ9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
SNX30Q5VWJ9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.48■■□□□ 1.51
SNX30Q5VWJ9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SNX30Q5VWJ9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SNX30Q5VWJ9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
SNX30Q5VWJ9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
SNX30Q5VWJ9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
SNX30Q5VWJ9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.48■■□□□ 1.51
SNX30Q5VWJ9 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SNX30Q5VWJ9 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.48■■□□□ 1.51
SNX30Q5VWJ9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SNX30Q5VWJ9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.47■■□□□ 1.51
SNX30Q5VWJ9 UNC93B8-201ENST00000511903 705 ntBASIC24.47■■□□□ 1.51
SNX30Q5VWJ9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SNX30Q5VWJ9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.46■■□□□ 1.51
SNX30Q5VWJ9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.46■■□□□ 1.51
SNX30Q5VWJ9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.46■■□□□ 1.51
SNX30Q5VWJ9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SNX30Q5VWJ9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
SNX30Q5VWJ9 AC093323.1-202ENST00000635031 2045 ntBASIC24.45■■□□□ 1.51
SNX30Q5VWJ9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
SNX30Q5VWJ9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.45■■□□□ 1.5
SNX30Q5VWJ9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
SNX30Q5VWJ9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.45■■□□□ 1.5
SNX30Q5VWJ9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.45■■□□□ 1.5
SNX30Q5VWJ9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.45■■□□□ 1.5
SNX30Q5VWJ9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SNX30Q5VWJ9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SNX30Q5VWJ9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNX30Q5VWJ9 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNX30Q5VWJ9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.44■■□□□ 1.5
SNX30Q5VWJ9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.44■■□□□ 1.5
SNX30Q5VWJ9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.44■■□□□ 1.5
SNX30Q5VWJ9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.44■■□□□ 1.5
SNX30Q5VWJ9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNX30Q5VWJ9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNX30Q5VWJ9 SLC6A10P-202ENST00000431994 2058 ntBASIC24.44■■□□□ 1.5
SNX30Q5VWJ9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNX30Q5VWJ9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.43■■□□□ 1.5
SNX30Q5VWJ9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms