Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SRP54P61011 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.06■■□□□ 1.28
SRP54P61011 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SRP54P61011 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SRP54P61011 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SRP54P61011 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
SRP54P61011 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.05■■□□□ 1.28
SRP54P61011 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.05■■□□□ 1.28
SRP54P61011 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.05■■□□□ 1.28
SRP54P61011 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
SRP54P61011 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SRP54P61011 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.05■■□□□ 1.28
SRP54P61011 AC010997.5-201ENST00000609182 354 ntBASIC23.04■■□□□ 1.28
SRP54P61011 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.04■■□□□ 1.28
SRP54P61011 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SRP54P61011 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SRP54P61011 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.03■■□□□ 1.28
SRP54P61011 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SRP54P61011 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
SRP54P61011 DUSP8P4-201ENST00000399538 1761 ntBASIC23.03■■□□□ 1.28
SRP54P61011 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.03■■□□□ 1.28
SRP54P61011 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SRP54P61011 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SRP54P61011 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.02■■□□□ 1.28
SRP54P61011 MTDHP2-201ENST00000601468 714 ntBASIC23.02■■□□□ 1.28
SRP54P61011 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
SRP54P61011 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
SRP54P61011 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SRP54P61011 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SRP54P61011 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SRP54P61011 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SRP54P61011 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
SRP54P61011 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SRP54P61011 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.01■■□□□ 1.27
SRP54P61011 AC091060.1-201ENST00000623524 1766 ntBASIC23.01■■□□□ 1.27
SRP54P61011 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23■■□□□ 1.27
SRP54P61011 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23■■□□□ 1.27
SRP54P61011 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
SRP54P61011 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23■■□□□ 1.27
SRP54P61011 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23■■□□□ 1.27
SRP54P61011 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SRP54P61011 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23■■□□□ 1.27
SRP54P61011 AC008406.3-201ENST00000620001 1374 ntBASIC23■■□□□ 1.27
SRP54P61011 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
SRP54P61011 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SRP54P61011 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.99■■□□□ 1.27
SRP54P61011 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SRP54P61011 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.99■■□□□ 1.27
SRP54P61011 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.99■■□□□ 1.27
SRP54P61011 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.99■■□□□ 1.27
SRP54P61011 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.99■■□□□ 1.27
SRP54P61011 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.99■■□□□ 1.27
SRP54P61011 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
SRP54P61011 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.99■■□□□ 1.27
SRP54P61011 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.98■■□□□ 1.27
SRP54P61011 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.98■■□□□ 1.27
SRP54P61011 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.98■■□□□ 1.27
SRP54P61011 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
SRP54P61011 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.98■■□□□ 1.27
SRP54P61011 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
SRP54P61011 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SRP54P61011 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.97■■□□□ 1.27
SRP54P61011 AC145676.1-201ENST00000514988 2004 ntBASIC22.97■■□□□ 1.27
SRP54P61011 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SRP54P61011 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SRP54P61011 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.96■■□□□ 1.27
SRP54P61011 MIR6724-1-201ENST00000616420 92 ntBASIC22.96■■□□□ 1.27
SRP54P61011 MIR6724-2-201ENST00000616483 92 ntBASIC22.96■■□□□ 1.27
SRP54P61011 MIR6724-4-201ENST00000617390 92 ntBASIC22.96■■□□□ 1.27
SRP54P61011 MIR6724-3-201ENST00000622482 92 ntBASIC22.96■■□□□ 1.27
SRP54P61011 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SRP54P61011 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.95■■□□□ 1.26
SRP54P61011 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
SRP54P61011 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.95■■□□□ 1.26
SRP54P61011 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.95■■□□□ 1.26
SRP54P61011 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SRP54P61011 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SRP54P61011 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SRP54P61011 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SRP54P61011 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SRP54P61011 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SRP54P61011 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.94■■□□□ 1.26
SRP54P61011 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.94■■□□□ 1.26
SRP54P61011 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.94■■□□□ 1.26
SRP54P61011 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
SRP54P61011 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
SRP54P61011 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SRP54P61011 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.93■■□□□ 1.26
SRP54P61011 SLC6A10P-202ENST00000431994 2058 ntBASIC22.93■■□□□ 1.26
SRP54P61011 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.92■■□□□ 1.26
SRP54P61011 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
SRP54P61011 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SRP54P61011 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SRP54P61011 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.92■■□□□ 1.26
SRP54P61011 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.92■■□□□ 1.26
SRP54P61011 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.92■■□□□ 1.26
SRP54P61011 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.92■■□□□ 1.26
SRP54P61011 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.92■■□□□ 1.26
SRP54P61011 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SRP54P61011 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms