Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP3S2P59780 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.99■□□□□ 0.79
AP3S2P59780 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.99■□□□□ 0.79
AP3S2P59780 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
AP3S2P59780 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.99■□□□□ 0.79
AP3S2P59780 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP3S2P59780 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP3S2P59780 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.98■□□□□ 0.79
AP3S2P59780 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AP3S2P59780 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP3S2P59780 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.98■□□□□ 0.79
AP3S2P59780 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
AP3S2P59780 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
AP3S2P59780 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP3S2P59780 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
AP3S2P59780 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.97■□□□□ 0.79
AP3S2P59780 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP3S2P59780 AC233723.2-201ENST00000623798 2106 ntBASIC19.97■□□□□ 0.79
AP3S2P59780 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP3S2P59780 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
AP3S2P59780 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP3S2P59780 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.96■□□□□ 0.79
AP3S2P59780 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
AP3S2P59780 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
AP3S2P59780 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.95■□□□□ 0.78
AP3S2P59780 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
AP3S2P59780 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
AP3S2P59780 MIR6089-201ENST00000616698 64 ntBASIC19.95■□□□□ 0.78
AP3S2P59780 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
AP3S2P59780 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP3S2P59780 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP3S2P59780 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
AP3S2P59780 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP3S2P59780 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
AP3S2P59780 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP3S2P59780 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
AP3S2P59780 SUZ12P1-203ENST00000578195 985 ntBASIC19.94■□□□□ 0.78
AP3S2P59780 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP3S2P59780 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP3S2P59780 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP3S2P59780 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
AP3S2P59780 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
AP3S2P59780 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
AP3S2P59780 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
AP3S2P59780 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP3S2P59780 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.94■□□□□ 0.78
AP3S2P59780 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP3S2P59780 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.93■□□□□ 0.78
AP3S2P59780 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP3S2P59780 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP3S2P59780 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
AP3S2P59780 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
AP3S2P59780 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP3S2P59780 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
AP3S2P59780 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.93■□□□□ 0.78
AP3S2P59780 AL359504.2-201ENST00000605506 1601 ntBASIC19.93■□□□□ 0.78
AP3S2P59780 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
AP3S2P59780 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.92■□□□□ 0.78
AP3S2P59780 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
AP3S2P59780 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP3S2P59780 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
AP3S2P59780 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP3S2P59780 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP3S2P59780 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
AP3S2P59780 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP3S2P59780 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
AP3S2P59780 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
AP3S2P59780 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
AP3S2P59780 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.92■□□□□ 0.78
AP3S2P59780 LINC00565-201ENST00000562710 2331 ntBASIC19.92■□□□□ 0.78
AP3S2P59780 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP3S2P59780 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.92■□□□□ 0.78
AP3S2P59780 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP3S2P59780 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.91■□□□□ 0.78
AP3S2P59780 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.91■□□□□ 0.78
AP3S2P59780 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP3S2P59780 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
AP3S2P59780 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
AP3S2P59780 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
AP3S2P59780 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
AP3S2P59780 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP3S2P59780 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP3S2P59780 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
AP3S2P59780 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP3S2P59780 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.91■□□□□ 0.78
AP3S2P59780 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP3S2P59780 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP3S2P59780 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP3S2P59780 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP3S2P59780 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
AP3S2P59780 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
AP3S2P59780 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP3S2P59780 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP3S2P59780 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
AP3S2P59780 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
AP3S2P59780 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
AP3S2P59780 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP3S2P59780 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
AP3S2P59780 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.88■□□□□ 0.77
AP3S2P59780 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms