Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	PRM2	YIL037C	1971 nt		5.75	□□□□□ -1.49
CAF16	P43569	SIR1	YKR101W	1965 nt		5.75	□□□□□ -1.49
CAF16	P43569	FOB1	YDR110W	1701 nt		5.75	□□□□□ -1.49
CAF16	P43569	DOS2	YDR068W	933 nt		5.75	□□□□□ -1.49
CAF16	P43569	RPL12A	YEL054C	498 nt		5.75	□□□□□ -1.49
CAF16	P43569	HVG1	YER039C	750 nt		5.75	□□□□□ -1.49
CAF16	P43569	YGR283C	YGR283C	1026 nt		5.75	□□□□□ -1.49
CAF16	P43569	YJR142W	YJR142W	1029 nt		5.75	□□□□□ -1.49
CAF16	P43569	RPF2	YKR081C	1035 nt		5.75	□□□□□ -1.49
CAF16	P43569	TAL1	YLR354C	1008 nt		5.75	□□□□□ -1.49
CAF16	P43569	TSR2	YLR435W	618 nt		5.75	□□□□□ -1.49
CAF16	P43569	ATG29	YPL166W	642 nt		5.75	□□□□□ -1.49
CAF16	P43569	SLX1	YBR228W	915 nt		5.75	□□□□□ -1.49
CAF16	P43569	RNY1	YPL123C	1305 nt		5.74	□□□□□ -1.49
CAF16	P43569	UBP7	YIL156W	3216 nt		5.74	□□□□□ -1.49
CAF16	P43569	RSM10	YDR041W	612 nt		5.74	□□□□□ -1.49
CAF16	P43569	ENT5	YDR153C	1236 nt		5.74	□□□□□ -1.49
CAF16	P43569	BUD26	YDR241W	288 nt		5.74	□□□□□ -1.49
CAF16	P43569	RML2	YEL050C	1182 nt		5.74	□□□□□ -1.49
CAF16	P43569	HSP150	YJL159W	1242 nt		5.74	□□□□□ -1.49
CAF16	P43569	RPS0B	YLR048W	759 nt		5.74	□□□□□ -1.49
CAF16	P43569	CPR6	YLR216C	1116 nt		5.74	□□□□□ -1.49
CAF16	P43569	YNL226W	YNL226W	411 nt		5.74	□□□□□ -1.49
CAF16	P43569	TLG2	YOL018C	1194 nt		5.74	□□□□□ -1.49
CAF16	P43569	YOR268C	YOR268C	399 nt		5.74	□□□□□ -1.49
CAF16	P43569	SET5	YHR207C	1581 nt		5.74	□□□□□ -1.49
CAF16	P43569	SAC6	YDR129C	1929 nt		5.74	□□□□□ -1.49
CAF16	P43569	MRC1	YCL061C	3291 nt		5.73	□□□□□ -1.49
CAF16	P43569	PCT1	YGR202C	1275 nt		5.73	□□□□□ -1.49
CAF16	P43569	PAN5	YHR063C	1140 nt		5.73	□□□□□ -1.49
CAF16	P43569	AIM23	YJL131C	1071 nt		5.73	□□□□□ -1.49
CAF16	P43569	SFH5	YJL145W	885 nt		5.73	□□□□□ -1.49
CAF16	P43569	MDH1	YKL085W	1005 nt		5.73	□□□□□ -1.49
CAF16	P43569	EBP2	YKL172W	1284 nt		5.73	□□□□□ -1.49
CAF16	P43569	ICT1	YLR099C	1185 nt		5.73	□□□□□ -1.49
CAF16	P43569	SML1	YML058W	315 nt		5.73	□□□□□ -1.49
CAF16	P43569	YNL092W	YNL092W	1203 nt		5.73	□□□□□ -1.49
CAF16	P43569	MRPS12	YNR036C	462 nt		5.73	□□□□□ -1.49
CAF16	P43569	RPS28A	YOR167C	204 nt		5.73	□□□□□ -1.49
CAF16	P43569	CST26	YBR042C	1194 nt		5.73	□□□□□ -1.49
CAF16	P43569	YFL042C	YFL042C	2025 nt		5.72	□□□□□ -1.49
CAF16	P43569	GIP1	YBR045C	1920 nt		5.72	□□□□□ -1.49
CAF16	P43569	THI22	YPR121W	1719 nt		5.72	□□□□□ -1.49
CAF16	P43569	BUD30	YDL151C	582 nt		5.72	□□□□□ -1.49
CAF16	P43569	YPT1	YFL038C	621 nt		5.72	□□□□□ -1.49
CAF16	P43569	YFR034W-A	YFR034W-A	288 nt		5.72	□□□□□ -1.49
CAF16	P43569	tL(UAA)B1	tL(UAA)B1	84 nt		5.72	□□□□□ -1.49
CAF16	P43569	tL(UAA)B2	tL(UAA)B2	84 nt		5.72	□□□□□ -1.49
CAF16	P43569	tL(UAA)D	tL(UAA)D	84 nt		5.72	□□□□□ -1.49
CAF16	P43569	SUP51	tL(UAA)J	84 nt		5.72	□□□□□ -1.49
CAF16	P43569	tL(UAA)K	tL(UAA)K	84 nt		5.72	□□□□□ -1.49
CAF16	P43569	tL(UAA)L	tL(UAA)L	84 nt		5.72	□□□□□ -1.49
CAF16	P43569	tL(UAA)N	tL(UAA)N	84 nt		5.72	□□□□□ -1.49
CAF16	P43569	TIS11	YLR136C	858 nt		5.72	□□□□□ -1.49
CAF16	P43569	FUS3	YBL016W	1062 nt		5.72	□□□□□ -1.49
CAF16	P43569	SLM4	YBR077C	489 nt		5.72	□□□□□ -1.49
CAF16	P43569	MSI1	YBR195C	1269 nt		5.72	□□□□□ -1.49
CAF16	P43569	SSK1	YLR006C	2139 nt		5.72	□□□□□ -1.49
CAF16	P43569	LAT1	YNL071W	1449 nt		5.72	□□□□□ -1.49
CAF16	P43569	VPS5	YOR069W	2028 nt		5.72	□□□□□ -1.49
CAF16	P43569	PRP9	YDL030W	1593 nt		5.72	□□□□□ -1.49
CAF16	P43569	MPP10	YJR002W	1782 nt		5.71	□□□□□ -1.5
CAF16	P43569	AIM6	YDL237W	1173 nt		5.71	□□□□□ -1.5
CAF16	P43569	NUP42	YDR192C	1293 nt		5.71	□□□□□ -1.5
CAF16	P43569	MRPL7	YDR237W	879 nt		5.71	□□□□□ -1.5
CAF16	P43569	HAT2	YEL056W	1206 nt		5.71	□□□□□ -1.5
CAF16	P43569	RPN11	YFR004W	921 nt		5.71	□□□□□ -1.5
CAF16	P43569	BGL2	YGR282C	942 nt		5.71	□□□□□ -1.5
CAF16	P43569	SEC28	YIL076W	891 nt		5.71	□□□□□ -1.5
CAF16	P43569	CBF1	YJR060W	1056 nt		5.71	□□□□□ -1.5
CAF16	P43569	HEK2	YBL032W	1146 nt		5.71	□□□□□ -1.5
CAF16	P43569	SPG5	YMR191W	1122 nt		5.71	□□□□□ -1.5
CAF16	P43569	TEX1	YNL253W	1269 nt		5.71	□□□□□ -1.5
CAF16	P43569	RTC4	YNL254C	1206 nt		5.71	□□□□□ -1.5
CAF16	P43569	GSP2	YOR185C	663 nt		5.71	□□□□□ -1.5
CAF16	P43569	YPL191C	YPL191C	1083 nt		5.71	□□□□□ -1.5
CAF16	P43569	YBR113W	YBR113W	483 nt		5.71	□□□□□ -1.5
CAF16	P43569	CNA1	YLR433C	1662 nt		5.71	□□□□□ -1.5
CAF16	P43569	YML133C	YML133C	4125 nt		5.71	□□□□□ -1.5
CAF16	P43569	MET3	YJR010W	1536 nt		5.7	□□□□□ -1.5
CAF16	P43569	NOT3	YIL038C	2511 nt		5.7	□□□□□ -1.5
CAF16	P43569	LUC7	YDL087C	786 nt		5.7	□□□□□ -1.5
CAF16	P43569	PIB1	YDR313C	861 nt		5.7	□□□□□ -1.5
CAF16	P43569	YPR1	YDR368W	939 nt		5.7	□□□□□ -1.5
CAF16	P43569	tG(GCC)B	tG(GCC)B	71 nt		5.7	□□□□□ -1.5
CAF16	P43569	SUF16	tG(GCC)C	71 nt		5.7	□□□□□ -1.5
CAF16	P43569	tG(GCC)D1	tG(GCC)D1	71 nt		5.7	□□□□□ -1.5
CAF16	P43569	tG(GCC)D2	tG(GCC)D2	71 nt		5.7	□□□□□ -1.5
CAF16	P43569	tG(GCC)E	tG(GCC)E	71 nt		5.7	□□□□□ -1.5
CAF16	P43569	SUF20	tG(GCC)F1	71 nt		5.7	□□□□□ -1.5
CAF16	P43569	tG(GCC)F2	tG(GCC)F2	71 nt		5.7	□□□□□ -1.5
CAF16	P43569	tG(GCC)G1	tG(GCC)G1	71 nt		5.7	□□□□□ -1.5
CAF16	P43569	tG(GCC)G2	tG(GCC)G2	71 nt		5.7	□□□□□ -1.5
CAF16	P43569	tG(GCC)J1	tG(GCC)J1	71 nt		5.7	□□□□□ -1.5
CAF16	P43569	SUF23	tG(GCC)J2	71 nt		5.7	□□□□□ -1.5
CAF16	P43569	tG(GCC)M	tG(GCC)M	71 nt		5.7	□□□□□ -1.5
CAF16	P43569	tG(GCC)O1	tG(GCC)O1	71 nt		5.7	□□□□□ -1.5
CAF16	P43569	SUF17	tG(GCC)O2	71 nt		5.7	□□□□□ -1.5
CAF16	P43569	tG(GCC)P1	tG(GCC)P1	71 nt		5.7	□□□□□ -1.5
CAF16	P43569	tG(GCC)P2	tG(GCC)P2	71 nt		5.7	□□□□□ -1.5

Retrieved 100 of 7,029 protein–RNA pairs in 55.2 ms