Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 YPR098CYPR098C 486 nt4.75□□□□□ -1.65
CUP9P41817 EIS1YMR031C 2532 nt4.75□□□□□ -1.65
CUP9P41817 GDA1YEL042W 1557 nt4.74□□□□□ -1.65
CUP9P41817 SET5YHR207C 1581 nt4.74□□□□□ -1.65
CUP9P41817 QRI1YDL103C 1434 nt4.74□□□□□ -1.65
CUP9P41817 YCR075W-AYCR075W-A 228 nt4.74□□□□□ -1.65
CUP9P41817 YLR296WYLR296W 327 nt4.74□□□□□ -1.65
CUP9P41817 MRPL4YLR439W 960 nt4.74□□□□□ -1.65
CUP9P41817 PRE7YBL041W 726 nt4.74□□□□□ -1.65
CUP9P41817 OXP1YKL215C 3861 nt4.74□□□□□ -1.65
CUP9P41817 ERG7YHR072W 2196 nt4.74□□□□□ -1.65
CUP9P41817 COQ6YGR255C 1440 nt4.73□□□□□ -1.65
CUP9P41817 UTR4YEL038W 684 nt4.73□□□□□ -1.65
CUP9P41817 BUD28YLR062C 378 nt4.73□□□□□ -1.65
CUP9P41817 GUF1YLR289W 1938 nt4.73□□□□□ -1.65
CUP9P41817 SPS22YCL048W 1392 nt4.73□□□□□ -1.65
CUP9P41817 RIM101YHL027W 1878 nt4.73□□□□□ -1.65
CUP9P41817 LCP5YER127W 1074 nt4.72□□□□□ -1.65
CUP9P41817 RPB4YJL140W 666 nt4.72□□□□□ -1.65
CUP9P41817 CDC11YJR076C 1248 nt4.72□□□□□ -1.65
CUP9P41817 YKL223WYKL223W 333 nt4.72□□□□□ -1.65
CUP9P41817 YFL052WYFL052W 1398 nt4.72□□□□□ -1.65
CUP9P41817 COT1YOR316C 1320 nt4.72□□□□□ -1.65
CUP9P41817 RFA1YAR007C 1866 nt4.71□□□□□ -1.66
CUP9P41817 VCX1YDL128W 1236 nt4.71□□□□□ -1.66
CUP9P41817 YJL171CYJL171C 1191 nt4.71□□□□□ -1.66
CUP9P41817 MSN2YMR037C 2115 nt4.71□□□□□ -1.66
CUP9P41817 YBL044WYBL044W 369 nt4.71□□□□□ -1.66
CUP9P41817 CLP1YOR250C 1338 nt4.71□□□□□ -1.66
CUP9P41817 VBA1YMR088C 1689 nt4.7□□□□□ -1.66
CUP9P41817 DFG5YMR238W 1377 nt4.7□□□□□ -1.66
CUP9P41817 CDC16YKL022C 2523 nt4.7□□□□□ -1.66
CUP9P41817 CDC43YGL155W 1131 nt4.7□□□□□ -1.66
CUP9P41817 HOR7YMR251W-A 180 nt4.7□□□□□ -1.66
CUP9P41817 OST3YOR085W 1053 nt4.7□□□□□ -1.66
CUP9P41817 RDL2YOR286W 450 nt4.7□□□□□ -1.66
CUP9P41817 MRL1YPR079W 1146 nt4.7□□□□□ -1.66
CUP9P41817 ROG3YFR022W 2202 nt4.7□□□□□ -1.66
CUP9P41817 CST6YIL036W 1764 nt4.7□□□□□ -1.66
CUP9P41817 YOR1YGR281W 4434 nt4.7□□□□□ -1.66
CUP9P41817 FET3YMR058W 1911 nt4.7□□□□□ -1.66
CUP9P41817 APJ1YNL077W 1587 nt4.7□□□□□ -1.66
CUP9P41817 PDH1YPR002W 1551 nt4.7□□□□□ -1.66
CUP9P41817 TUB2YFL037W 1374 nt4.69□□□□□ -1.66
CUP9P41817 GAL10YBR019C 2100 nt4.69□□□□□ -1.66
CUP9P41817 HEM3YDL205C 984 nt4.69□□□□□ -1.66
CUP9P41817 RPN12YFR052W 825 nt4.69□□□□□ -1.66
CUP9P41817 JAC1YGL018C 555 nt4.69□□□□□ -1.66
CUP9P41817 PGA2YNL149C 390 nt4.69□□□□□ -1.66
CUP9P41817 CMR1YDL156W 1569 nt4.69□□□□□ -1.66
CUP9P41817 RAT1YOR048C 3021 nt4.69□□□□□ -1.66
CUP9P41817 AVT3YKL146W 2079 nt4.68□□□□□ -1.66
CUP9P41817 CKB2YOR039W 777 nt4.68□□□□□ -1.66
CUP9P41817 DCC1YCL016C 1143 nt4.68□□□□□ -1.66
CUP9P41817 HXT3YDR345C 1704 nt4.68□□□□□ -1.66
CUP9P41817 HAP1YLR256W 4509 nt4.68□□□□□ -1.66
CUP9P41817 HFI1YPL254W 1467 nt4.68□□□□□ -1.66
CUP9P41817 RSC2YLR357W 2670 nt4.68□□□□□ -1.66
CUP9P41817 AAP1YHR047C 2571 nt4.67□□□□□ -1.66
CUP9P41817 CHL4YDR254W 1377 nt4.67□□□□□ -1.66
CUP9P41817 YFR034W-AYFR034W-A 288 nt4.67□□□□□ -1.66
CUP9P41817 MSH1YHR120W 2880 nt4.67□□□□□ -1.66
CUP9P41817 ECM3YOR092W 1842 nt4.67□□□□□ -1.66
CUP9P41817 KIP2YPL155C 2121 nt4.66□□□□□ -1.66
CUP9P41817 YDR053WYDR053W 396 nt4.66□□□□□ -1.66
CUP9P41817 YBR016WYBR016W 387 nt4.66□□□□□ -1.66
CUP9P41817 QDR1YIL120W 1692 nt4.66□□□□□ -1.66
CUP9P41817 TAH18YPR048W 1872 nt4.66□□□□□ -1.66
CUP9P41817 YEL077CYEL077C 3834 nt4.66□□□□□ -1.66
CUP9P41817 EEB1YPL095C 1371 nt4.65□□□□□ -1.66
CUP9P41817 DBP9YLR276C 1785 nt4.65□□□□□ -1.66
CUP9P41817 CHS5YLR330W 2016 nt4.65□□□□□ -1.66
CUP9P41817 BUD9YGR041W 1644 nt4.65□□□□□ -1.66
CUP9P41817 YEL053W-AYEL053W-A 348 nt4.65□□□□□ -1.67
CUP9P41817 ECM15YBL001C 315 nt4.65□□□□□ -1.67
CUP9P41817 YML101C-AYML101C-A 318 nt4.65□□□□□ -1.67
CUP9P41817 IDP3YNL009W 1263 nt4.65□□□□□ -1.67
CUP9P41817 ODC2YOR222W 924 nt4.65□□□□□ -1.67
CUP9P41817 TOM5YPR133W-A 153 nt4.65□□□□□ -1.67
CUP9P41817 ATG20YDL113C 1923 nt4.64□□□□□ -1.67
CUP9P41817 YIL067CYIL067C 2037 nt4.64□□□□□ -1.67
CUP9P41817 GLO2YDR272W 825 nt4.64□□□□□ -1.67
CUP9P41817 ARO2YGL148W 1131 nt4.64□□□□□ -1.67
CUP9P41817 ATG33YLR356W 594 nt4.64□□□□□ -1.67
CUP9P41817 LEM3YNL323W 1245 nt4.64□□□□□ -1.67
CUP9P41817 MLF3YNL074C 1359 nt4.64□□□□□ -1.67
CUP9P41817 DNF2YDR093W 4839 nt4.63□□□□□ -1.67
CUP9P41817 SMF3YLR034C 1422 nt4.63□□□□□ -1.67
CUP9P41817 MNN10YDR245W 1182 nt4.63□□□□□ -1.67
CUP9P41817 CWC21YDR482C 408 nt4.63□□□□□ -1.67
CUP9P41817 VPS29YHR012W 849 nt4.63□□□□□ -1.67
CUP9P41817 MND2YIR025W 1107 nt4.63□□□□□ -1.67
CUP9P41817 SKG1YKR100C 1068 nt4.63□□□□□ -1.67
CUP9P41817 HPF1YOL155C 2904 nt4.63□□□□□ -1.67
CUP9P41817 PDC1YLR044C 1692 nt4.63□□□□□ -1.67
CUP9P41817 VPS1YKR001C 2115 nt4.63□□□□□ -1.67
CUP9P41817 GLT1YDL171C 6438 nt4.62□□□□□ -1.67
CUP9P41817 MAK32YCR019W 1092 nt4.62□□□□□ -1.67
CUP9P41817 CAB4YGR277C 918 nt4.62□□□□□ -1.67
CUP9P41817 APN1YKL114C 1104 nt4.62□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 57.2 ms