Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
USP6P35125 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC32.08■■■□□ 2.73
USP6P35125 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC32.08■■■□□ 2.73
USP6P35125 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC32.08■■■□□ 2.73
USP6P35125 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC32.07■■■□□ 2.72
USP6P35125 AC010501.1-201ENST00000606270 1962 ntBASIC32.07■■■□□ 2.72
USP6P35125 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
USP6P35125 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC32.07■■■□□ 2.72
USP6P35125 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC32.07■■■□□ 2.72
USP6P35125 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
USP6P35125 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
USP6P35125 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC32.06■■■□□ 2.72
USP6P35125 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
USP6P35125 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
USP6P35125 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC32.05■■■□□ 2.72
USP6P35125 AC133561.4-201ENST00000566112 224 ntBASIC32.05■■■□□ 2.72
USP6P35125 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC32.05■■■□□ 2.72
USP6P35125 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
USP6P35125 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC32.05■■■□□ 2.72
USP6P35125 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC32.05■■■□□ 2.72
USP6P35125 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
USP6P35125 AC005837.3-201ENST00000612163 286 ntBASIC32.04■■■□□ 2.72
USP6P35125 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
USP6P35125 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
USP6P35125 LBH-205ENST00000407930 756 ntTSL 2 BASIC32.03■■■□□ 2.72
USP6P35125 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC32.03■■■□□ 2.72
USP6P35125 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC32.03■■■□□ 2.72
USP6P35125 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
USP6P35125 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
USP6P35125 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC32.02■■■□□ 2.72
USP6P35125 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
USP6P35125 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC32.01■■■□□ 2.72
USP6P35125 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC32.01■■■□□ 2.72
USP6P35125 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
USP6P35125 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC32■■■□□ 2.71
USP6P35125 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC32■■■□□ 2.71
USP6P35125 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
USP6P35125 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
USP6P35125 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
USP6P35125 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC32■■■□□ 2.71
USP6P35125 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC32■■■□□ 2.71
USP6P35125 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
USP6P35125 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
USP6P35125 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC31.99■■■□□ 2.71
USP6P35125 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
USP6P35125 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC31.99■■■□□ 2.71
USP6P35125 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC31.98■■■□□ 2.71
USP6P35125 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
USP6P35125 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
USP6P35125 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC31.98■■■□□ 2.71
USP6P35125 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC31.97■■■□□ 2.71
USP6P35125 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC31.97■■■□□ 2.71
USP6P35125 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC31.97■■■□□ 2.71
USP6P35125 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
USP6P35125 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
USP6P35125 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC31.95■■■□□ 2.71
USP6P35125 AC106739.1-201ENST00000617035 715 ntBASIC31.95■■■□□ 2.71
USP6P35125 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC31.95■■■□□ 2.7
USP6P35125 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC31.95■■■□□ 2.7
USP6P35125 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC31.95■■■□□ 2.7
USP6P35125 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
USP6P35125 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC31.94■■■□□ 2.7
USP6P35125 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
USP6P35125 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
USP6P35125 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
USP6P35125 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
USP6P35125 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
USP6P35125 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
USP6P35125 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
USP6P35125 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
USP6P35125 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC31.93■■■□□ 2.7
USP6P35125 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC31.92■■■□□ 2.7
USP6P35125 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
USP6P35125 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC31.92■■■□□ 2.7
USP6P35125 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC31.92■■■□□ 2.7
USP6P35125 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
USP6P35125 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC31.92■■■□□ 2.7
USP6P35125 AL031432.3-201ENST00000607698 485 ntBASIC31.92■■■□□ 2.7
USP6P35125 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC31.91■■■□□ 2.7
USP6P35125 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC31.91■■■□□ 2.7
USP6P35125 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
USP6P35125 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
USP6P35125 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC31.9■■■□□ 2.7
USP6P35125 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC31.9■■■□□ 2.7
USP6P35125 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC31.9■■■□□ 2.7
USP6P35125 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
USP6P35125 AC004448.1-201ENST00000458332 883 ntBASIC31.9■■■□□ 2.7
USP6P35125 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC31.89■■■□□ 2.7
USP6P35125 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC31.89■■■□□ 2.7
USP6P35125 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC31.89■■■□□ 2.7
USP6P35125 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
USP6P35125 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
USP6P35125 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
USP6P35125 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
USP6P35125 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC31.87■■■□□ 2.69
USP6P35125 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
USP6P35125 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC31.87■■■□□ 2.69
USP6P35125 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
USP6P35125 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC31.86■■■□□ 2.69
USP6P35125 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC31.86■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms