Protein–RNA interactions for Protein: P34228

SEF1, Putative transcription factor SEF1, yeastyeast

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEF1P34228 TEP1YNL128W 1305 nt5.33□□□□□ -1.56
SEF1P34228 MDH3YDL078C 1032 nt5.33□□□□□ -1.56
SEF1P34228 YEL028WYEL028W 462 nt5.33□□□□□ -1.56
SEF1P34228 YFL064CYFL064C 525 nt5.33□□□□□ -1.56
SEF1P34228 SKI6YGR195W 741 nt5.33□□□□□ -1.56
SEF1P34228 MAC1YMR021C 1254 nt5.33□□□□□ -1.56
SEF1P34228 YPR202WYPR202W 717 nt5.33□□□□□ -1.56
SEF1P34228 HOF1YMR032W 2010 nt5.33□□□□□ -1.56
SEF1P34228 FRS2YFL022C 1512 nt5.33□□□□□ -1.56
SEF1P34228 ABZ1YNR033W 2364 nt5.33□□□□□ -1.56
SEF1P34228 ECM3YOR092W 1842 nt5.32□□□□□ -1.56
SEF1P34228 LAP2YNL045W 2016 nt5.32□□□□□ -1.56
SEF1P34228 RPS16BYDL083C 432 nt5.32□□□□□ -1.56
SEF1P34228 DCN1YLR128W 810 nt5.32□□□□□ -1.56
SEF1P34228 IFA38YBR159W 1044 nt5.32□□□□□ -1.56
SEF1P34228 ATG32YIL146C 1590 nt5.32□□□□□ -1.56
SEF1P34228 PYC1YGL062W 3537 nt5.32□□□□□ -1.56
SEF1P34228 VMA13YPR036W 1437 nt5.31□□□□□ -1.56
SEF1P34228 ATR1YML116W 1629 nt5.31□□□□□ -1.56
SEF1P34228 PGK1YCR012W 1251 nt5.31□□□□□ -1.56
SEF1P34228 ARP2YDL029W 1176 nt5.31□□□□□ -1.56
SEF1P34228 SPT3YDR392W 1014 nt5.31□□□□□ -1.56
SEF1P34228 YDR541CYDR541C 1035 nt5.31□□□□□ -1.56
SEF1P34228 PIC2YER053C 903 nt5.31□□□□□ -1.56
SEF1P34228 RPT1YKL145W 1404 nt5.31□□□□□ -1.56
SEF1P34228 TNA1YGR260W 1605 nt5.3□□□□□ -1.56
SEF1P34228 PRP24YMR268C 1335 nt5.3□□□□□ -1.56
SEF1P34228 YDL057WYDL057W 987 nt5.3□□□□□ -1.56
SEF1P34228 CTR2YHR175W 570 nt5.3□□□□□ -1.56
SEF1P34228 EFM3YJR129C 1020 nt5.3□□□□□ -1.56
SEF1P34228 YKR075CYKR075C 924 nt5.3□□□□□ -1.56
SEF1P34228 NOP13YNL175C 1212 nt5.3□□□□□ -1.56
SEF1P34228 SFB3YHR098C 2790 nt5.3□□□□□ -1.56
SEF1P34228 MAL11YGR289C 1851 nt5.3□□□□□ -1.56
SEF1P34228 MRE11YMR224C 2079 nt5.3□□□□□ -1.56
SEF1P34228 YMD8YML038C 1329 nt5.29□□□□□ -1.56
SEF1P34228 GIP1YBR045C 1920 nt5.29□□□□□ -1.56
SEF1P34228 TUL1YKL034W 2277 nt5.29□□□□□ -1.56
SEF1P34228 CWC21YDR482C 408 nt5.29□□□□□ -1.56
SEF1P34228 MLC1YGL106W 450 nt5.29□□□□□ -1.56
SEF1P34228 SKI8YGL213C 1194 nt5.29□□□□□ -1.56
SEF1P34228 LST8YNL006W 912 nt5.29□□□□□ -1.56
SEF1P34228 GLN1YPR035W 1113 nt5.29□□□□□ -1.56
SEF1P34228 GIP2YER054C 1647 nt5.29□□□□□ -1.56
SEF1P34228 VAN1YML115C 1608 nt5.29□□□□□ -1.56
SEF1P34228 RSM10YDR041W 612 nt5.28□□□□□ -1.56
SEF1P34228 FMP48YGR052W 1110 nt5.28□□□□□ -1.56
SEF1P34228 YGR176WYGR176W 348 nt5.28□□□□□ -1.56
SEF1P34228 SUP19tS(UGA)E 82 nt5.28□□□□□ -1.56
SEF1P34228 SUP17tS(UGA)I 82 nt5.28□□□□□ -1.56
SEF1P34228 SUP16tS(UGA)P 82 nt5.28□□□□□ -1.56
SEF1P34228 MRPL4YLR439W 960 nt5.28□□□□□ -1.56
SEF1P34228 YML083CYML083C 1257 nt5.28□□□□□ -1.56
SEF1P34228 TOM40YMR203W 1164 nt5.28□□□□□ -1.56
SEF1P34228 YNR040WYNR040W 771 nt5.28□□□□□ -1.56
SEF1P34228 YOL163WYOL163W 510 nt5.28□□□□□ -1.56
SEF1P34228 CAR1YPL111W 1002 nt5.28□□□□□ -1.56
SEF1P34228 HSP26YBR072W 645 nt5.28□□□□□ -1.56
SEF1P34228 SVF1YDR346C 1446 nt5.28□□□□□ -1.56
SEF1P34228 STE12YHR084W 2067 nt5.28□□□□□ -1.56
SEF1P34228 CNE1YAL058W 1509 nt5.28□□□□□ -1.56
SEF1P34228 VRP1YLR337C 2454 nt5.28□□□□□ -1.56
SEF1P34228 VPS1YKR001C 2115 nt5.27□□□□□ -1.57
SEF1P34228 TEA1YOR337W 2280 nt5.27□□□□□ -1.57
SEF1P34228 PCL10YGL134W 1302 nt5.27□□□□□ -1.57
SEF1P34228 MNN5YJL186W 1761 nt5.27□□□□□ -1.57
SEF1P34228 FAA4YMR246W 2085 nt5.27□□□□□ -1.57
SEF1P34228 SNM1YDR478W 597 nt5.27□□□□□ -1.57
SEF1P34228 YHL017WYHL017W 1599 nt5.27□□□□□ -1.57
SEF1P34228 SUP2tY(GUA)D 75 nt5.27□□□□□ -1.57
SEF1P34228 SUP11tY(GUA)F1 75 nt5.27□□□□□ -1.57
SEF1P34228 SUP6tY(GUA)F2 75 nt5.27□□□□□ -1.57
SEF1P34228 SUP7tY(GUA)J1 75 nt5.27□□□□□ -1.57
SEF1P34228 SUP4tY(GUA)J2 75 nt5.27□□□□□ -1.57
SEF1P34228 SUP5tY(GUA)M1 75 nt5.27□□□□□ -1.57
SEF1P34228 SUP8tY(GUA)M2 75 nt5.27□□□□□ -1.57
SEF1P34228 SUP3tY(GUA)O 75 nt5.27□□□□□ -1.57
SEF1P34228 MRS1YIR021W 1092 nt5.27□□□□□ -1.57
SEF1P34228 YKL031WYKL031W 414 nt5.27□□□□□ -1.57
SEF1P34228 YLR194CYLR194C 765 nt5.27□□□□□ -1.57
SEF1P34228 ADE13YLR359W 1449 nt5.27□□□□□ -1.57
SEF1P34228 SUE1YPR151C 621 nt5.27□□□□□ -1.57
SEF1P34228 YBR144CYBR144C 315 nt5.27□□□□□ -1.57
SEF1P34228 PMA1YGL008C 2757 nt5.26□□□□□ -1.57
SEF1P34228 YCR047W-AYCR047W-A 207 nt5.26□□□□□ -1.57
SEF1P34228 KNH1YDL049C 807 nt5.26□□□□□ -1.57
SEF1P34228 YBL081WYBL081W 1107 nt5.26□□□□□ -1.57
SEF1P34228 SSO1YPL232W 873 nt5.26□□□□□ -1.57
SEF1P34228 YPR123CYPR123C 435 nt5.26□□□□□ -1.57
SEF1P34228 VHS1YDR247W 1386 nt5.26□□□□□ -1.57
SEF1P34228 MCM3YEL032W 2916 nt5.26□□□□□ -1.57
SEF1P34228 GCR2YNL199C 1605 nt5.26□□□□□ -1.57
SEF1P34228 YJR124CYJR124C 1347 nt5.25□□□□□ -1.57
SEF1P34228 TAX4YJL083W 1815 nt5.25□□□□□ -1.57
SEF1P34228 ORC5YNL261W 1440 nt5.25□□□□□ -1.57
SEF1P34228 LYS12YIL094C 1116 nt5.25□□□□□ -1.57
SEF1P34228 tX(XXX)DtX(XXX)D 100 nt5.25□□□□□ -1.57
SEF1P34228 SFC1YJR095W 969 nt5.25□□□□□ -1.57
SEF1P34228 YKL223WYKL223W 333 nt5.25□□□□□ -1.57
SEF1P34228 ERG3YLR056W 1098 nt5.25□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 17.2 ms