Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MBD3L4A6NDZ8 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.73■□□□□ 0.91
MBD3L4A6NDZ8 SNX5-217ENST00000606557 1087 ntBASIC20.73■□□□□ 0.91
MBD3L4A6NDZ8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.73■□□□□ 0.91
MBD3L4A6NDZ8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MBD3L4A6NDZ8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MBD3L4A6NDZ8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.73■□□□□ 0.91
MBD3L4A6NDZ8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.72■□□□□ 0.91
MBD3L4A6NDZ8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD3L4A6NDZ8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD3L4A6NDZ8 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.72■□□□□ 0.91
MBD3L4A6NDZ8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.72■□□□□ 0.91
MBD3L4A6NDZ8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD3L4A6NDZ8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD3L4A6NDZ8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD3L4A6NDZ8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.71■□□□□ 0.91
MBD3L4A6NDZ8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.71■□□□□ 0.91
MBD3L4A6NDZ8 AC131281.2-201ENST00000520478 145 ntBASIC20.71■□□□□ 0.91
MBD3L4A6NDZ8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.71■□□□□ 0.91
MBD3L4A6NDZ8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD3L4A6NDZ8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3L4A6NDZ8 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.7■□□□□ 0.9
MBD3L4A6NDZ8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3L4A6NDZ8 AL356740.2-201ENST00000601559 647 ntBASIC20.7■□□□□ 0.9
MBD3L4A6NDZ8 MIR6722-201ENST00000617286 78 ntBASIC20.7■□□□□ 0.9
MBD3L4A6NDZ8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3L4A6NDZ8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.7■□□□□ 0.9
MBD3L4A6NDZ8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3L4A6NDZ8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3L4A6NDZ8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
MBD3L4A6NDZ8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MBD3L4A6NDZ8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MBD3L4A6NDZ8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
MBD3L4A6NDZ8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MBD3L4A6NDZ8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.69■□□□□ 0.9
MBD3L4A6NDZ8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.69■□□□□ 0.9
MBD3L4A6NDZ8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
MBD3L4A6NDZ8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.69■□□□□ 0.9
MBD3L4A6NDZ8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MBD3L4A6NDZ8 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD3L4A6NDZ8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD3L4A6NDZ8 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MBD3L4A6NDZ8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD3L4A6NDZ8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.68■□□□□ 0.9
MBD3L4A6NDZ8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
MBD3L4A6NDZ8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD3L4A6NDZ8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD3L4A6NDZ8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD3L4A6NDZ8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MBD3L4A6NDZ8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
MBD3L4A6NDZ8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MBD3L4A6NDZ8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.67■□□□□ 0.9
MBD3L4A6NDZ8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.67■□□□□ 0.9
MBD3L4A6NDZ8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MBD3L4A6NDZ8 AC091060.1-201ENST00000623524 1766 ntBASIC20.67■□□□□ 0.9
MBD3L4A6NDZ8 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.66■□□□□ 0.9
MBD3L4A6NDZ8 AC145676.1-201ENST00000514988 2004 ntBASIC20.66■□□□□ 0.9
MBD3L4A6NDZ8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MBD3L4A6NDZ8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MBD3L4A6NDZ8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.66■□□□□ 0.9
MBD3L4A6NDZ8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MBD3L4A6NDZ8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MBD3L4A6NDZ8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
MBD3L4A6NDZ8 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.66■□□□□ 0.9
MBD3L4A6NDZ8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.66■□□□□ 0.9
MBD3L4A6NDZ8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.66■□□□□ 0.9
MBD3L4A6NDZ8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.66■□□□□ 0.9
MBD3L4A6NDZ8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MBD3L4A6NDZ8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MBD3L4A6NDZ8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
MBD3L4A6NDZ8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
MBD3L4A6NDZ8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.66■□□□□ 0.9
MBD3L4A6NDZ8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MBD3L4A6NDZ8 SLC6A10P-202ENST00000431994 2058 ntBASIC20.65■□□□□ 0.9
MBD3L4A6NDZ8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MBD3L4A6NDZ8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MBD3L4A6NDZ8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
MBD3L4A6NDZ8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
MBD3L4A6NDZ8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.65■□□□□ 0.9
MBD3L4A6NDZ8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.65■□□□□ 0.9
MBD3L4A6NDZ8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MBD3L4A6NDZ8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
MBD3L4A6NDZ8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
MBD3L4A6NDZ8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MBD3L4A6NDZ8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.64■□□□□ 0.89
MBD3L4A6NDZ8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.64■□□□□ 0.89
MBD3L4A6NDZ8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.64■□□□□ 0.89
MBD3L4A6NDZ8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.64■□□□□ 0.89
MBD3L4A6NDZ8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.63■□□□□ 0.89
MBD3L4A6NDZ8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
MBD3L4A6NDZ8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MBD3L4A6NDZ8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MBD3L4A6NDZ8 AL136116.3-201ENST00000402907 1138 ntBASIC20.63■□□□□ 0.89
MBD3L4A6NDZ8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MBD3L4A6NDZ8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.63■□□□□ 0.89
MBD3L4A6NDZ8 MIR6089-201ENST00000616698 64 ntBASIC20.63■□□□□ 0.89
MBD3L4A6NDZ8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.63■□□□□ 0.89
MBD3L4A6NDZ8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MBD3L4A6NDZ8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.62■□□□□ 0.89
MBD3L4A6NDZ8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms