Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV22A0A0B4J277 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV22A0A0B4J277 AL133380.1-201ENST00000506013 324 ntBASIC13.25□□□□□ -0.29
TRAV22A0A0B4J277 AL031258.1-201ENST00000623562 325 ntBASIC13.25□□□□□ -0.29
TRAV22A0A0B4J277 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV22A0A0B4J277 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV22A0A0B4J277 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
TRAV22A0A0B4J277 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV22A0A0B4J277 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV22A0A0B4J277 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV22A0A0B4J277 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
TRAV22A0A0B4J277 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV22A0A0B4J277 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
TRAV22A0A0B4J277 AC137767.1-201ENST00000602918 1920 ntBASIC13.24□□□□□ -0.29
TRAV22A0A0B4J277 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV22A0A0B4J277 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV22A0A0B4J277 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV22A0A0B4J277 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV22A0A0B4J277 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV22A0A0B4J277 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV22A0A0B4J277 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV22A0A0B4J277 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV22A0A0B4J277 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV22A0A0B4J277 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
TRAV22A0A0B4J277 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV22A0A0B4J277 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV22A0A0B4J277 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV22A0A0B4J277 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV22A0A0B4J277 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV22A0A0B4J277 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV22A0A0B4J277 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV22A0A0B4J277 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV22A0A0B4J277 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV22A0A0B4J277 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV22A0A0B4J277 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV22A0A0B4J277 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRAV22A0A0B4J277 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV22A0A0B4J277 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV22A0A0B4J277 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV22A0A0B4J277 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV22A0A0B4J277 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC13.22□□□□□ -0.29
TRAV22A0A0B4J277 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV22A0A0B4J277 AC233723.2-201ENST00000623798 2106 ntBASIC13.22□□□□□ -0.29
TRAV22A0A0B4J277 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV22A0A0B4J277 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV22A0A0B4J277 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV22A0A0B4J277 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV22A0A0B4J277 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC13.22□□□□□ -0.29
TRAV22A0A0B4J277 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV22A0A0B4J277 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV22A0A0B4J277 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TRAV22A0A0B4J277 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAV22A0A0B4J277 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV22A0A0B4J277 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRAV22A0A0B4J277 GALC-202ENST00000393568 2054 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV22A0A0B4J277 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TRAV22A0A0B4J277 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
TRAV22A0A0B4J277 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV22A0A0B4J277 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV22A0A0B4J277 AC135983.2-203ENST00000454486 1613 ntBASIC13.21□□□□□ -0.29
TRAV22A0A0B4J277 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
TRAV22A0A0B4J277 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV22A0A0B4J277 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV22A0A0B4J277 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV22A0A0B4J277 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV22A0A0B4J277 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV22A0A0B4J277 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV22A0A0B4J277 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV22A0A0B4J277 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV22A0A0B4J277 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
TRAV22A0A0B4J277 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC13.21□□□□□ -0.3
TRAV22A0A0B4J277 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
TRAV22A0A0B4J277 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV22A0A0B4J277 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV22A0A0B4J277 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV22A0A0B4J277 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV22A0A0B4J277 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
TRAV22A0A0B4J277 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRAV22A0A0B4J277 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV22A0A0B4J277 NFE2L3P1-201ENST00000588207 1959 ntBASIC13.2□□□□□ -0.3
TRAV22A0A0B4J277 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV22A0A0B4J277 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV22A0A0B4J277 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV22A0A0B4J277 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV22A0A0B4J277 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAV22A0A0B4J277 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRAV22A0A0B4J277 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV22A0A0B4J277 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV22A0A0B4J277 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV22A0A0B4J277 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRAV22A0A0B4J277 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV22A0A0B4J277 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV22A0A0B4J277 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV22A0A0B4J277 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAV22A0A0B4J277 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV22A0A0B4J277 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
TRAV22A0A0B4J277 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV22A0A0B4J277 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV22A0A0B4J277 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV22A0A0B4J277 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms