Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SCN10AQ9Y5Y9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SCN10AQ9Y5Y9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC26.18■■□□□ 1.78
SCN10AQ9Y5Y9 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
SCN10AQ9Y5Y9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SCN10AQ9Y5Y9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SCN10AQ9Y5Y9 AC096887.2-201ENST00000623443 1957 ntBASIC26.17■■□□□ 1.78
SCN10AQ9Y5Y9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCN10AQ9Y5Y9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCN10AQ9Y5Y9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SCN10AQ9Y5Y9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SCN10AQ9Y5Y9 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.17■■□□□ 1.78
SCN10AQ9Y5Y9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCN10AQ9Y5Y9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SCN10AQ9Y5Y9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.16■■□□□ 1.78
SCN10AQ9Y5Y9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.16■■□□□ 1.78
SCN10AQ9Y5Y9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.16■■□□□ 1.78
SCN10AQ9Y5Y9 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SCN10AQ9Y5Y9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SCN10AQ9Y5Y9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SCN10AQ9Y5Y9 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SCN10AQ9Y5Y9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SCN10AQ9Y5Y9 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
SCN10AQ9Y5Y9 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.15■■□□□ 1.78
SCN10AQ9Y5Y9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.15■■□□□ 1.78
SCN10AQ9Y5Y9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.15■■□□□ 1.78
SCN10AQ9Y5Y9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.15■■□□□ 1.78
SCN10AQ9Y5Y9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.15■■□□□ 1.78
SCN10AQ9Y5Y9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SCN10AQ9Y5Y9 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SCN10AQ9Y5Y9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
SCN10AQ9Y5Y9 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
SCN10AQ9Y5Y9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.13■■□□□ 1.77
SCN10AQ9Y5Y9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC26.13■■□□□ 1.77
SCN10AQ9Y5Y9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SCN10AQ9Y5Y9 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SCN10AQ9Y5Y9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
SCN10AQ9Y5Y9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.13■■□□□ 1.77
SCN10AQ9Y5Y9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SCN10AQ9Y5Y9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.13■■□□□ 1.77
SCN10AQ9Y5Y9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.13■■□□□ 1.77
SCN10AQ9Y5Y9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SCN10AQ9Y5Y9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.12■■□□□ 1.77
SCN10AQ9Y5Y9 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.12■■□□□ 1.77
SCN10AQ9Y5Y9 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
SCN10AQ9Y5Y9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SCN10AQ9Y5Y9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
SCN10AQ9Y5Y9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.11■■□□□ 1.77
SCN10AQ9Y5Y9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SCN10AQ9Y5Y9 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.11■■□□□ 1.77
SCN10AQ9Y5Y9 AC133561.4-201ENST00000566112 224 ntBASIC26.11■■□□□ 1.77
SCN10AQ9Y5Y9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.11■■□□□ 1.77
SCN10AQ9Y5Y9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
SCN10AQ9Y5Y9 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
SCN10AQ9Y5Y9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SCN10AQ9Y5Y9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SCN10AQ9Y5Y9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
SCN10AQ9Y5Y9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
SCN10AQ9Y5Y9 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.09■■□□□ 1.77
SCN10AQ9Y5Y9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
SCN10AQ9Y5Y9 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
SCN10AQ9Y5Y9 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SCN10AQ9Y5Y9 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.08■■□□□ 1.77
SCN10AQ9Y5Y9 ERN1-208ENST00000606895 2068 ntBASIC26.08■■□□□ 1.77
SCN10AQ9Y5Y9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
SCN10AQ9Y5Y9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.08■■□□□ 1.77
SCN10AQ9Y5Y9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SCN10AQ9Y5Y9 AC090877.2-201ENST00000558441 1738 ntBASIC26.07■■□□□ 1.76
SCN10AQ9Y5Y9 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
SCN10AQ9Y5Y9 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.07■■□□□ 1.76
SCN10AQ9Y5Y9 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.07■■□□□ 1.76
SCN10AQ9Y5Y9 AC097639.1-201ENST00000565519 1891 ntBASIC26.07■■□□□ 1.76
SCN10AQ9Y5Y9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.07■■□□□ 1.76
SCN10AQ9Y5Y9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
SCN10AQ9Y5Y9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.06■■□□□ 1.76
SCN10AQ9Y5Y9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SCN10AQ9Y5Y9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC26.06■■□□□ 1.76
SCN10AQ9Y5Y9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.06■■□□□ 1.76
SCN10AQ9Y5Y9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SCN10AQ9Y5Y9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
SCN10AQ9Y5Y9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.05■■□□□ 1.76
SCN10AQ9Y5Y9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC26.05■■□□□ 1.76
SCN10AQ9Y5Y9 SUDS3P1-201ENST00000505831 966 ntBASIC26.05■■□□□ 1.76
SCN10AQ9Y5Y9 AC005837.3-201ENST00000612163 286 ntBASIC26.05■■□□□ 1.76
SCN10AQ9Y5Y9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SCN10AQ9Y5Y9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SCN10AQ9Y5Y9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
SCN10AQ9Y5Y9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SCN10AQ9Y5Y9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SCN10AQ9Y5Y9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SCN10AQ9Y5Y9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.04■■□□□ 1.76
SCN10AQ9Y5Y9 AC106739.1-201ENST00000617035 715 ntBASIC26.04■■□□□ 1.76
SCN10AQ9Y5Y9 MIR6722-201ENST00000617286 78 ntBASIC26.04■■□□□ 1.76
SCN10AQ9Y5Y9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.03■■□□□ 1.76
SCN10AQ9Y5Y9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SCN10AQ9Y5Y9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SCN10AQ9Y5Y9 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
SCN10AQ9Y5Y9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.03■■□□□ 1.76
SCN10AQ9Y5Y9 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.03■■□□□ 1.76
SCN10AQ9Y5Y9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms