Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
PCDHAC2Q9Y5I4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
PCDHAC2Q9Y5I4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PCDHAC2Q9Y5I4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PCDHAC2Q9Y5I4 CD72-202ENST00000378430 585 ntTSL 3 BASIC28.33■■■□□ 2.13
PCDHAC2Q9Y5I4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC28.33■■■□□ 2.13
PCDHAC2Q9Y5I4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC28.33■■■□□ 2.13
PCDHAC2Q9Y5I4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
PCDHAC2Q9Y5I4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHAC2Q9Y5I4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHAC2Q9Y5I4 AK3-203ENST00000447596 705 ntTSL 2 BASIC28.31■■■□□ 2.12
PCDHAC2Q9Y5I4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PCDHAC2Q9Y5I4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
PCDHAC2Q9Y5I4 ERN1-208ENST00000606895 2068 ntBASIC28.31■■■□□ 2.12
PCDHAC2Q9Y5I4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.3■■■□□ 2.12
PCDHAC2Q9Y5I4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC28.3■■■□□ 2.12
PCDHAC2Q9Y5I4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC28.3■■■□□ 2.12
PCDHAC2Q9Y5I4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
PCDHAC2Q9Y5I4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
PCDHAC2Q9Y5I4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC28.29■■■□□ 2.12
PCDHAC2Q9Y5I4 AC005837.3-201ENST00000612163 286 ntBASIC28.29■■■□□ 2.12
PCDHAC2Q9Y5I4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
PCDHAC2Q9Y5I4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PCDHAC2Q9Y5I4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC28.28■■■□□ 2.12
PCDHAC2Q9Y5I4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC28.28■■■□□ 2.12
PCDHAC2Q9Y5I4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PCDHAC2Q9Y5I4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC28.28■■■□□ 2.12
PCDHAC2Q9Y5I4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC28.28■■■□□ 2.12
PCDHAC2Q9Y5I4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
PCDHAC2Q9Y5I4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PCDHAC2Q9Y5I4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PCDHAC2Q9Y5I4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
PCDHAC2Q9Y5I4 AC096887.2-201ENST00000623443 1957 ntBASIC28.28■■■□□ 2.12
PCDHAC2Q9Y5I4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
PCDHAC2Q9Y5I4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC28.27■■■□□ 2.12
PCDHAC2Q9Y5I4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28.27■■■□□ 2.12
PCDHAC2Q9Y5I4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.12
PCDHAC2Q9Y5I4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
PCDHAC2Q9Y5I4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
PCDHAC2Q9Y5I4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
PCDHAC2Q9Y5I4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
PCDHAC2Q9Y5I4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PCDHAC2Q9Y5I4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
PCDHAC2Q9Y5I4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PCDHAC2Q9Y5I4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
PCDHAC2Q9Y5I4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.25■■■□□ 2.11
PCDHAC2Q9Y5I4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC28.25■■■□□ 2.11
PCDHAC2Q9Y5I4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PCDHAC2Q9Y5I4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
PCDHAC2Q9Y5I4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PCDHAC2Q9Y5I4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PCDHAC2Q9Y5I4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PCDHAC2Q9Y5I4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PCDHAC2Q9Y5I4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC28.23■■■□□ 2.11
PCDHAC2Q9Y5I4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PCDHAC2Q9Y5I4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PCDHAC2Q9Y5I4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
PCDHAC2Q9Y5I4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
PCDHAC2Q9Y5I4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC28.22■■■□□ 2.11
PCDHAC2Q9Y5I4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
PCDHAC2Q9Y5I4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC28.22■■■□□ 2.11
PCDHAC2Q9Y5I4 SNX5-217ENST00000606557 1087 ntBASIC28.22■■■□□ 2.11
PCDHAC2Q9Y5I4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC28.21■■■□□ 2.11
PCDHAC2Q9Y5I4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PCDHAC2Q9Y5I4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PCDHAC2Q9Y5I4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC28.21■■■□□ 2.11
PCDHAC2Q9Y5I4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC28.2■■■□□ 2.1
PCDHAC2Q9Y5I4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
PCDHAC2Q9Y5I4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
PCDHAC2Q9Y5I4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC28.19■■■□□ 2.1
PCDHAC2Q9Y5I4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC28.19■■■□□ 2.1
PCDHAC2Q9Y5I4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
PCDHAC2Q9Y5I4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
PCDHAC2Q9Y5I4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC28.18■■■□□ 2.1
PCDHAC2Q9Y5I4 AC090877.2-201ENST00000558441 1738 ntBASIC28.18■■■□□ 2.1
PCDHAC2Q9Y5I4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
PCDHAC2Q9Y5I4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PCDHAC2Q9Y5I4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PCDHAC2Q9Y5I4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC28.17■■■□□ 2.1
PCDHAC2Q9Y5I4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PCDHAC2Q9Y5I4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC28.17■■■□□ 2.1
PCDHAC2Q9Y5I4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC28.17■■■□□ 2.1
PCDHAC2Q9Y5I4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC28.17■■■□□ 2.1
PCDHAC2Q9Y5I4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
PCDHAC2Q9Y5I4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
PCDHAC2Q9Y5I4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PCDHAC2Q9Y5I4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC28.16■■■□□ 2.1
PCDHAC2Q9Y5I4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC28.16■■■□□ 2.1
PCDHAC2Q9Y5I4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC28.16■■■□□ 2.1
PCDHAC2Q9Y5I4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PCDHAC2Q9Y5I4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
PCDHAC2Q9Y5I4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PCDHAC2Q9Y5I4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
PCDHAC2Q9Y5I4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PCDHAC2Q9Y5I4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PCDHAC2Q9Y5I4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
PCDHAC2Q9Y5I4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC28.14■■■□□ 2.1
PCDHAC2Q9Y5I4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PCDHAC2Q9Y5I4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
PCDHAC2Q9Y5I4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms