Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.26■■□□□ 1.79
BLOC1S4Q9NUP1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
BLOC1S4Q9NUP1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
BLOC1S4Q9NUP1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.26■■□□□ 1.79
BLOC1S4Q9NUP1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
BLOC1S4Q9NUP1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
BLOC1S4Q9NUP1 AC139795.1-202ENST00000500444 432 ntBASIC26.25■■□□□ 1.79
BLOC1S4Q9NUP1 AC019171.1-201ENST00000601251 1056 ntBASIC26.25■■□□□ 1.79
BLOC1S4Q9NUP1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
BLOC1S4Q9NUP1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
BLOC1S4Q9NUP1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.24■■□□□ 1.79
BLOC1S4Q9NUP1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
BLOC1S4Q9NUP1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.24■■□□□ 1.79
BLOC1S4Q9NUP1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
BLOC1S4Q9NUP1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.23■■□□□ 1.79
BLOC1S4Q9NUP1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
BLOC1S4Q9NUP1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
BLOC1S4Q9NUP1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
BLOC1S4Q9NUP1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.23■■□□□ 1.79
BLOC1S4Q9NUP1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
BLOC1S4Q9NUP1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
BLOC1S4Q9NUP1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC26.23■■□□□ 1.79
BLOC1S4Q9NUP1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
BLOC1S4Q9NUP1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
BLOC1S4Q9NUP1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
BLOC1S4Q9NUP1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
BLOC1S4Q9NUP1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC26.22■■□□□ 1.79
BLOC1S4Q9NUP1 AL592295.1-201ENST00000400984 884 ntBASIC26.22■■□□□ 1.79
BLOC1S4Q9NUP1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.22■■□□□ 1.79
BLOC1S4Q9NUP1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.22■■□□□ 1.79
BLOC1S4Q9NUP1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.22■■□□□ 1.79
BLOC1S4Q9NUP1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.21■■□□□ 1.79
BLOC1S4Q9NUP1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.21■■□□□ 1.79
BLOC1S4Q9NUP1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.21■■□□□ 1.79
BLOC1S4Q9NUP1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
BLOC1S4Q9NUP1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.21■■□□□ 1.79
BLOC1S4Q9NUP1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.21■■□□□ 1.79
BLOC1S4Q9NUP1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.21■■□□□ 1.79
BLOC1S4Q9NUP1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
BLOC1S4Q9NUP1 AC010980.1-201ENST00000587192 1142 ntBASIC26.21■■□□□ 1.79
BLOC1S4Q9NUP1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
BLOC1S4Q9NUP1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
BLOC1S4Q9NUP1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
BLOC1S4Q9NUP1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
BLOC1S4Q9NUP1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.2■■□□□ 1.79
BLOC1S4Q9NUP1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
BLOC1S4Q9NUP1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
BLOC1S4Q9NUP1 BHLHE23-202ENST00000612929 1109 ntBASIC26.2■■□□□ 1.78
BLOC1S4Q9NUP1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC26.2■■□□□ 1.78
BLOC1S4Q9NUP1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC26.2■■□□□ 1.78
BLOC1S4Q9NUP1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC26.19■■□□□ 1.78
BLOC1S4Q9NUP1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
BLOC1S4Q9NUP1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
BLOC1S4Q9NUP1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
BLOC1S4Q9NUP1 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.19■■□□□ 1.78
BLOC1S4Q9NUP1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
BLOC1S4Q9NUP1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
BLOC1S4Q9NUP1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
BLOC1S4Q9NUP1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.18■■□□□ 1.78
BLOC1S4Q9NUP1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
BLOC1S4Q9NUP1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.18■■□□□ 1.78
BLOC1S4Q9NUP1 AC074183.2-201ENST00000623112 922 ntBASIC26.18■■□□□ 1.78
BLOC1S4Q9NUP1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
BLOC1S4Q9NUP1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.18■■□□□ 1.78
BLOC1S4Q9NUP1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.18■■□□□ 1.78
BLOC1S4Q9NUP1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.17■■□□□ 1.78
BLOC1S4Q9NUP1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.17■■□□□ 1.78
BLOC1S4Q9NUP1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
BLOC1S4Q9NUP1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
BLOC1S4Q9NUP1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
BLOC1S4Q9NUP1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
BLOC1S4Q9NUP1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.17■■□□□ 1.78
BLOC1S4Q9NUP1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
BLOC1S4Q9NUP1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
BLOC1S4Q9NUP1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
BLOC1S4Q9NUP1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
BLOC1S4Q9NUP1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
BLOC1S4Q9NUP1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
BLOC1S4Q9NUP1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
BLOC1S4Q9NUP1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.15■■□□□ 1.78
BLOC1S4Q9NUP1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
BLOC1S4Q9NUP1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.15■■□□□ 1.78
BLOC1S4Q9NUP1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.15■■□□□ 1.78
BLOC1S4Q9NUP1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
BLOC1S4Q9NUP1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.15■■□□□ 1.78
BLOC1S4Q9NUP1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
BLOC1S4Q9NUP1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
BLOC1S4Q9NUP1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
BLOC1S4Q9NUP1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
BLOC1S4Q9NUP1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
BLOC1S4Q9NUP1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.14■■□□□ 1.78
BLOC1S4Q9NUP1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.14■■□□□ 1.78
BLOC1S4Q9NUP1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
BLOC1S4Q9NUP1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
BLOC1S4Q9NUP1 AC090877.2-201ENST00000558441 1738 ntBASIC26.14■■□□□ 1.77
BLOC1S4Q9NUP1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
BLOC1S4Q9NUP1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
BLOC1S4Q9NUP1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
BLOC1S4Q9NUP1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
BLOC1S4Q9NUP1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms