Protein–RNA interactions for Protein: Q96A99

PTX4, Pentraxin-4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4Q96A99 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTX4Q96A99 AC025884.2-201ENST00000553429 711 ntBASIC20.03■□□□□ 0.8
PTX4Q96A99 MIR3960-201ENST00000583311 91 ntBASIC20.03■□□□□ 0.8
PTX4Q96A99 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTX4Q96A99 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTX4Q96A99 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTX4Q96A99 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTX4Q96A99 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTX4Q96A99 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.02■□□□□ 0.8
PTX4Q96A99 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTX4Q96A99 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.02■□□□□ 0.8
PTX4Q96A99 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.02■□□□□ 0.8
PTX4Q96A99 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTX4Q96A99 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.02■□□□□ 0.8
PTX4Q96A99 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PTX4Q96A99 ABCB10P4-201ENST00000566803 2184 ntBASIC20.02■□□□□ 0.8
PTX4Q96A99 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PTX4Q96A99 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.01■□□□□ 0.79
PTX4Q96A99 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTX4Q96A99 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PTX4Q96A99 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PTX4Q96A99 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PTX4Q96A99 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.01■□□□□ 0.79
PTX4Q96A99 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PTX4Q96A99 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PTX4Q96A99 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PTX4Q96A99 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PTX4Q96A99 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTX4Q96A99 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PTX4Q96A99 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTX4Q96A99 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PTX4Q96A99 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20■□□□□ 0.79
PTX4Q96A99 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTX4Q96A99 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTX4Q96A99 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTX4Q96A99 HLA-L-211ENST00000482052 1765 ntBASIC19.99■□□□□ 0.79
PTX4Q96A99 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTX4Q96A99 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.99■□□□□ 0.79
PTX4Q96A99 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTX4Q96A99 MIR3648-2-201ENST00000581792 180 ntBASIC19.99■□□□□ 0.79
PTX4Q96A99 MIR3648-1-201ENST00000615959 180 ntBASIC19.99■□□□□ 0.79
PTX4Q96A99 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTX4Q96A99 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTX4Q96A99 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTX4Q96A99 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PTX4Q96A99 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTX4Q96A99 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTX4Q96A99 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.99■□□□□ 0.79
PTX4Q96A99 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTX4Q96A99 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTX4Q96A99 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTX4Q96A99 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTX4Q96A99 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PTX4Q96A99 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PTX4Q96A99 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTX4Q96A99 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTX4Q96A99 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTX4Q96A99 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.97■□□□□ 0.79
PTX4Q96A99 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTX4Q96A99 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.97■□□□□ 0.79
PTX4Q96A99 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.97■□□□□ 0.79
PTX4Q96A99 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PTX4Q96A99 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTX4Q96A99 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.96■□□□□ 0.79
PTX4Q96A99 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PTX4Q96A99 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTX4Q96A99 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTX4Q96A99 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PTX4Q96A99 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.96■□□□□ 0.79
PTX4Q96A99 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTX4Q96A99 AL157400.5-201ENST00000507624 621 ntBASIC19.96■□□□□ 0.79
PTX4Q96A99 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.96■□□□□ 0.79
PTX4Q96A99 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTX4Q96A99 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTX4Q96A99 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTX4Q96A99 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTX4Q96A99 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTX4Q96A99 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.95■□□□□ 0.78
PTX4Q96A99 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.95■□□□□ 0.78
PTX4Q96A99 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTX4Q96A99 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTX4Q96A99 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTX4Q96A99 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
PTX4Q96A99 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTX4Q96A99 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTX4Q96A99 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTX4Q96A99 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PTX4Q96A99 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTX4Q96A99 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTX4Q96A99 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTX4Q96A99 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.93■□□□□ 0.78
PTX4Q96A99 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTX4Q96A99 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTX4Q96A99 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.93■□□□□ 0.78
PTX4Q96A99 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.93■□□□□ 0.78
PTX4Q96A99 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.93■□□□□ 0.78
PTX4Q96A99 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTX4Q96A99 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTX4Q96A99 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PTX4Q96A99 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms