Protein–RNA interactions for Protein: Q6P3X8

PGBD2, PiggyBac transposable element-derived protein 2, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2Q6P3X8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.49■■□□□ 1.03
PGBD2Q6P3X8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PGBD2Q6P3X8 AC004812.2-201ENST00000611079 2094 ntBASIC21.49■■□□□ 1.03
PGBD2Q6P3X8 AC133561.1-201ENST00000568600 2415 ntBASIC21.49■■□□□ 1.03
PGBD2Q6P3X8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PGBD2Q6P3X8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
PGBD2Q6P3X8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PGBD2Q6P3X8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PGBD2Q6P3X8 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PGBD2Q6P3X8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PGBD2Q6P3X8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PGBD2Q6P3X8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.48■■□□□ 1.03
PGBD2Q6P3X8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PGBD2Q6P3X8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PGBD2Q6P3X8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PGBD2Q6P3X8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.48■■□□□ 1.03
PGBD2Q6P3X8 SMPD5-203ENST00000639008 1464 ntBASIC21.48■■□□□ 1.03
PGBD2Q6P3X8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PGBD2Q6P3X8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.48■■□□□ 1.03
PGBD2Q6P3X8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PGBD2Q6P3X8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.47■■□□□ 1.03
PGBD2Q6P3X8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.47■■□□□ 1.03
PGBD2Q6P3X8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.47■■□□□ 1.03
PGBD2Q6P3X8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PGBD2Q6P3X8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PGBD2Q6P3X8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PGBD2Q6P3X8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.46■■□□□ 1.03
PGBD2Q6P3X8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PGBD2Q6P3X8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
PGBD2Q6P3X8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.45■■□□□ 1.02
PGBD2Q6P3X8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PGBD2Q6P3X8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PGBD2Q6P3X8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.45■■□□□ 1.02
PGBD2Q6P3X8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PGBD2Q6P3X8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.45■■□□□ 1.02
PGBD2Q6P3X8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PGBD2Q6P3X8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PGBD2Q6P3X8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PGBD2Q6P3X8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PGBD2Q6P3X8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
PGBD2Q6P3X8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PGBD2Q6P3X8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PGBD2Q6P3X8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.44■■□□□ 1.02
PGBD2Q6P3X8 AC092296.2-201ENST00000589470 999 ntBASIC21.44■■□□□ 1.02
PGBD2Q6P3X8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PGBD2Q6P3X8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.44■■□□□ 1.02
PGBD2Q6P3X8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PGBD2Q6P3X8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PGBD2Q6P3X8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PGBD2Q6P3X8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PGBD2Q6P3X8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PGBD2Q6P3X8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PGBD2Q6P3X8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PGBD2Q6P3X8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PGBD2Q6P3X8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PGBD2Q6P3X8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PGBD2Q6P3X8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PGBD2Q6P3X8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PGBD2Q6P3X8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PGBD2Q6P3X8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PGBD2Q6P3X8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
PGBD2Q6P3X8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.42■■□□□ 1.02
PGBD2Q6P3X8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.41■■□□□ 1.02
PGBD2Q6P3X8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.41■■□□□ 1.02
PGBD2Q6P3X8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.41■■□□□ 1.02
PGBD2Q6P3X8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PGBD2Q6P3X8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PGBD2Q6P3X8 AC012676.1-201ENST00000574705 1949 ntBASIC21.41■■□□□ 1.02
PGBD2Q6P3X8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PGBD2Q6P3X8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PGBD2Q6P3X8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PGBD2Q6P3X8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PGBD2Q6P3X8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PGBD2Q6P3X8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PGBD2Q6P3X8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PGBD2Q6P3X8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PGBD2Q6P3X8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PGBD2Q6P3X8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PGBD2Q6P3X8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PGBD2Q6P3X8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
PGBD2Q6P3X8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.41■■□□□ 1.02
PGBD2Q6P3X8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.4■■□□□ 1.02
PGBD2Q6P3X8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PGBD2Q6P3X8 AC068473.5-201ENST00000616428 2072 ntBASIC21.4■■□□□ 1.02
PGBD2Q6P3X8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.4■■□□□ 1.02
PGBD2Q6P3X8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PGBD2Q6P3X8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PGBD2Q6P3X8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PGBD2Q6P3X8 ABCB10P4-201ENST00000566803 2184 ntBASIC21.4■■□□□ 1.02
PGBD2Q6P3X8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
PGBD2Q6P3X8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
PGBD2Q6P3X8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PGBD2Q6P3X8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PGBD2Q6P3X8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PGBD2Q6P3X8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.38■■□□□ 1.01
PGBD2Q6P3X8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PGBD2Q6P3X8 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.38■■□□□ 1.01
PGBD2Q6P3X8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.38■■□□□ 1.01
PGBD2Q6P3X8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.38■■□□□ 1.01
PGBD2Q6P3X8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms