Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
CDC42BPAQ5VT25 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
CDC42BPAQ5VT25 AC096887.2-201ENST00000623443 1957 ntBASIC36.23■■■■□ 3.39
CDC42BPAQ5VT25 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
CDC42BPAQ5VT25 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC36.23■■■■□ 3.39
CDC42BPAQ5VT25 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC36.22■■■■□ 3.39
CDC42BPAQ5VT25 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
CDC42BPAQ5VT25 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC36.21■■■■□ 3.39
CDC42BPAQ5VT25 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC36.21■■■■□ 3.39
CDC42BPAQ5VT25 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC36.21■■■■□ 3.39
CDC42BPAQ5VT25 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC36.21■■■■□ 3.39
CDC42BPAQ5VT25 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC36.2■■■■□ 3.39
CDC42BPAQ5VT25 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.38
CDC42BPAQ5VT25 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC36.2■■■■□ 3.38
CDC42BPAQ5VT25 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC36.2■■■■□ 3.38
CDC42BPAQ5VT25 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
CDC42BPAQ5VT25 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC36.19■■■■□ 3.38
CDC42BPAQ5VT25 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC36.19■■■■□ 3.38
CDC42BPAQ5VT25 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC36.18■■■■□ 3.38
CDC42BPAQ5VT25 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC36.18■■■■□ 3.38
CDC42BPAQ5VT25 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC36.18■■■■□ 3.38
CDC42BPAQ5VT25 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
CDC42BPAQ5VT25 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC36.17■■■■□ 3.38
CDC42BPAQ5VT25 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC36.17■■■■□ 3.38
CDC42BPAQ5VT25 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC36.17■■■■□ 3.38
CDC42BPAQ5VT25 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC36.17■■■■□ 3.38
CDC42BPAQ5VT25 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC36.17■■■■□ 3.38
CDC42BPAQ5VT25 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
CDC42BPAQ5VT25 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC36.17■■■■□ 3.38
CDC42BPAQ5VT25 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC36.17■■■■□ 3.38
CDC42BPAQ5VT25 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
CDC42BPAQ5VT25 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC36.17■■■■□ 3.38
CDC42BPAQ5VT25 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC36.17■■■■□ 3.38
CDC42BPAQ5VT25 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC36.16■■■■□ 3.38
CDC42BPAQ5VT25 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC36.16■■■■□ 3.38
CDC42BPAQ5VT25 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC36.15■■■■□ 3.38
CDC42BPAQ5VT25 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC36.15■■■■□ 3.38
CDC42BPAQ5VT25 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC36.15■■■■□ 3.38
CDC42BPAQ5VT25 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC36.14■■■■□ 3.38
CDC42BPAQ5VT25 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC36.14■■■■□ 3.38
CDC42BPAQ5VT25 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC36.13■■■■□ 3.37
CDC42BPAQ5VT25 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC36.13■■■■□ 3.37
CDC42BPAQ5VT25 AC133561.4-201ENST00000566112 224 ntBASIC36.13■■■■□ 3.37
CDC42BPAQ5VT25 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC36.13■■■■□ 3.37
CDC42BPAQ5VT25 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC36.13■■■■□ 3.37
CDC42BPAQ5VT25 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
CDC42BPAQ5VT25 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC36.12■■■■□ 3.37
CDC42BPAQ5VT25 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC36.11■■■■□ 3.37
CDC42BPAQ5VT25 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
CDC42BPAQ5VT25 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC36.11■■■■□ 3.37
CDC42BPAQ5VT25 GUK1-205ENST00000366722 850 ntTSL 3 BASIC36.11■■■■□ 3.37
CDC42BPAQ5VT25 RARRES2P6-201ENST00000567333 442 ntBASIC36.11■■■■□ 3.37
CDC42BPAQ5VT25 AL031432.3-201ENST00000607698 485 ntBASIC36.11■■■■□ 3.37
CDC42BPAQ5VT25 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
CDC42BPAQ5VT25 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC36.11■■■■□ 3.37
CDC42BPAQ5VT25 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC36.11■■■■□ 3.37
CDC42BPAQ5VT25 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC36.1■■■■□ 3.37
CDC42BPAQ5VT25 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC36.1■■■■□ 3.37
CDC42BPAQ5VT25 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC36.1■■■■□ 3.37
CDC42BPAQ5VT25 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC36.1■■■■□ 3.37
CDC42BPAQ5VT25 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC36.1■■■■□ 3.37
CDC42BPAQ5VT25 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC36.1■■■■□ 3.37
CDC42BPAQ5VT25 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC36.1■■■■□ 3.37
CDC42BPAQ5VT25 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC36.09■■■■□ 3.37
CDC42BPAQ5VT25 ZNRF2P3-201ENST00000424200 374 ntBASIC36.09■■■■□ 3.37
CDC42BPAQ5VT25 SUDS3P1-201ENST00000505831 966 ntBASIC36.09■■■■□ 3.37
CDC42BPAQ5VT25 AC106739.1-201ENST00000617035 715 ntBASIC36.08■■■■□ 3.37
CDC42BPAQ5VT25 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC36.08■■■■□ 3.37
CDC42BPAQ5VT25 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
CDC42BPAQ5VT25 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC36.08■■■■□ 3.37
CDC42BPAQ5VT25 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC36.08■■■■□ 3.37
CDC42BPAQ5VT25 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC36.07■■■■□ 3.37
CDC42BPAQ5VT25 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC36.07■■■■□ 3.36
CDC42BPAQ5VT25 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC36.07■■■■□ 3.36
CDC42BPAQ5VT25 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC36.07■■■■□ 3.36
CDC42BPAQ5VT25 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
CDC42BPAQ5VT25 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC36.06■■■■□ 3.36
CDC42BPAQ5VT25 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC36.06■■■■□ 3.36
CDC42BPAQ5VT25 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC36.06■■■■□ 3.36
CDC42BPAQ5VT25 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC36.06■■■■□ 3.36
CDC42BPAQ5VT25 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
CDC42BPAQ5VT25 AC005837.3-201ENST00000612163 286 ntBASIC36.05■■■■□ 3.36
CDC42BPAQ5VT25 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC36.05■■■■□ 3.36
CDC42BPAQ5VT25 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
CDC42BPAQ5VT25 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC36.05■■■■□ 3.36
CDC42BPAQ5VT25 AC090877.2-201ENST00000558441 1738 ntBASIC36.05■■■■□ 3.36
CDC42BPAQ5VT25 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
CDC42BPAQ5VT25 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC36.04■■■■□ 3.36
CDC42BPAQ5VT25 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC36.04■■■■□ 3.36
CDC42BPAQ5VT25 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
CDC42BPAQ5VT25 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC36.03■■■■□ 3.36
CDC42BPAQ5VT25 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC36.03■■■■□ 3.36
CDC42BPAQ5VT25 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC36.03■■■■□ 3.36
CDC42BPAQ5VT25 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC36.03■■■■□ 3.36
CDC42BPAQ5VT25 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC36.03■■■■□ 3.36
CDC42BPAQ5VT25 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC36.03■■■■□ 3.36
CDC42BPAQ5VT25 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC36.03■■■■□ 3.36
CDC42BPAQ5VT25 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
CDC42BPAQ5VT25 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC36.02■■■■□ 3.36
CDC42BPAQ5VT25 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
Retrieved 100 of 98,524 protein–RNA pairs in 150.9 ms