Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
ATP6V1AP38606 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
ATP6V1AP38606 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
ATP6V1AP38606 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC30.33■■■□□ 2.45
ATP6V1AP38606 RARRES2P6-201ENST00000567333 442 ntBASIC30.33■■■□□ 2.45
ATP6V1AP38606 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
ATP6V1AP38606 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
ATP6V1AP38606 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
ATP6V1AP38606 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
ATP6V1AP38606 UNC93B3-201ENST00000308076 687 ntBASIC30.32■■■□□ 2.44
ATP6V1AP38606 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC30.32■■■□□ 2.44
ATP6V1AP38606 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC30.32■■■□□ 2.44
ATP6V1AP38606 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
ATP6V1AP38606 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
ATP6V1AP38606 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC30.31■■■□□ 2.44
ATP6V1AP38606 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC30.31■■■□□ 2.44
ATP6V1AP38606 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC30.31■■■□□ 2.44
ATP6V1AP38606 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
ATP6V1AP38606 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
ATP6V1AP38606 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC30.31■■■□□ 2.44
ATP6V1AP38606 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
ATP6V1AP38606 SHF-208ENST00000560734 1731 ntTSL 3 BASIC30.3■■■□□ 2.44
ATP6V1AP38606 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC30.3■■■□□ 2.44
ATP6V1AP38606 MIR6722-201ENST00000617286 78 ntBASIC30.3■■■□□ 2.44
ATP6V1AP38606 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
ATP6V1AP38606 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
ATP6V1AP38606 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC30.29■■■□□ 2.44
ATP6V1AP38606 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC30.29■■■□□ 2.44
ATP6V1AP38606 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC30.29■■■□□ 2.44
ATP6V1AP38606 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC30.29■■■□□ 2.44
ATP6V1AP38606 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
ATP6V1AP38606 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
ATP6V1AP38606 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
ATP6V1AP38606 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
ATP6V1AP38606 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
ATP6V1AP38606 AL031432.3-201ENST00000607698 485 ntBASIC30.28■■■□□ 2.44
ATP6V1AP38606 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
ATP6V1AP38606 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
ATP6V1AP38606 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC30.27■■■□□ 2.44
ATP6V1AP38606 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
ATP6V1AP38606 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
ATP6V1AP38606 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC30.27■■■□□ 2.44
ATP6V1AP38606 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
ATP6V1AP38606 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC30.26■■■□□ 2.44
ATP6V1AP38606 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
ATP6V1AP38606 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
ATP6V1AP38606 SUDS3P1-201ENST00000505831 966 ntBASIC30.26■■■□□ 2.43
ATP6V1AP38606 AL136162.1-201ENST00000607711 1078 ntBASIC30.26■■■□□ 2.43
ATP6V1AP38606 AC092666.2-201ENST00000613287 246 ntBASIC30.26■■■□□ 2.43
ATP6V1AP38606 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
ATP6V1AP38606 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
ATP6V1AP38606 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ATP6V1AP38606 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ATP6V1AP38606 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC30.25■■■□□ 2.43
ATP6V1AP38606 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ATP6V1AP38606 AC090877.2-201ENST00000558441 1738 ntBASIC30.25■■■□□ 2.43
ATP6V1AP38606 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
ATP6V1AP38606 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC30.24■■■□□ 2.43
ATP6V1AP38606 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC30.24■■■□□ 2.43
ATP6V1AP38606 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
ATP6V1AP38606 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
ATP6V1AP38606 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
ATP6V1AP38606 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
ATP6V1AP38606 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
ATP6V1AP38606 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
ATP6V1AP38606 AC026271.2-201ENST00000428091 497 ntBASIC30.23■■■□□ 2.43
ATP6V1AP38606 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC30.23■■■□□ 2.43
ATP6V1AP38606 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC30.23■■■□□ 2.43
ATP6V1AP38606 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
ATP6V1AP38606 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC30.23■■■□□ 2.43
ATP6V1AP38606 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
ATP6V1AP38606 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
ATP6V1AP38606 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
ATP6V1AP38606 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
ATP6V1AP38606 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
ATP6V1AP38606 AC135279.3-201ENST00000610945 1311 ntBASIC30.22■■■□□ 2.43
ATP6V1AP38606 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
ATP6V1AP38606 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
ATP6V1AP38606 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC30.21■■■□□ 2.43
ATP6V1AP38606 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
ATP6V1AP38606 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
ATP6V1AP38606 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.2■■■□□ 2.43
ATP6V1AP38606 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC30.2■■■□□ 2.43
ATP6V1AP38606 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.43
ATP6V1AP38606 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
ATP6V1AP38606 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
ATP6V1AP38606 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC30.19■■■□□ 2.42
ATP6V1AP38606 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
ATP6V1AP38606 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
ATP6V1AP38606 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ATP6V1AP38606 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ATP6V1AP38606 LGR4-203ENST00000480977 492 ntTSL 2 BASIC30.18■■■□□ 2.42
ATP6V1AP38606 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC30.18■■■□□ 2.42
ATP6V1AP38606 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC30.18■■■□□ 2.42
ATP6V1AP38606 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
ATP6V1AP38606 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
ATP6V1AP38606 SRD5A1P1-201ENST00000442297 786 ntBASIC30.17■■■□□ 2.42
ATP6V1AP38606 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC30.17■■■□□ 2.42
ATP6V1AP38606 AC024257.2-201ENST00000549699 147 ntBASIC30.17■■■□□ 2.42
ATP6V1AP38606 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms