Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
COL1A2P08123 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
COL1A2P08123 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
COL1A2P08123 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.05■■□□□ 1.76
COL1A2P08123 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.05■■□□□ 1.76
COL1A2P08123 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
COL1A2P08123 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.05■■□□□ 1.76
COL1A2P08123 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.04■■□□□ 1.76
COL1A2P08123 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.04■■□□□ 1.76
COL1A2P08123 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
COL1A2P08123 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.03■■□□□ 1.76
COL1A2P08123 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
COL1A2P08123 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
COL1A2P08123 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.03■■□□□ 1.76
COL1A2P08123 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
COL1A2P08123 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
COL1A2P08123 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.03■■□□□ 1.76
COL1A2P08123 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
COL1A2P08123 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
COL1A2P08123 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
COL1A2P08123 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
COL1A2P08123 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL1A2P08123 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
COL1A2P08123 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.02■■□□□ 1.76
COL1A2P08123 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.02■■□□□ 1.76
COL1A2P08123 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.02■■□□□ 1.76
COL1A2P08123 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL1A2P08123 DUSP8P4-201ENST00000399538 1761 ntBASIC26.02■■□□□ 1.76
COL1A2P08123 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
COL1A2P08123 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
COL1A2P08123 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.01■■□□□ 1.75
COL1A2P08123 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.01■■□□□ 1.75
COL1A2P08123 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
COL1A2P08123 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
COL1A2P08123 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
COL1A2P08123 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26■■□□□ 1.75
COL1A2P08123 MTDHP2-201ENST00000601468 714 ntBASIC26■■□□□ 1.75
COL1A2P08123 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
COL1A2P08123 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
COL1A2P08123 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.99■■□□□ 1.75
COL1A2P08123 AC010997.5-201ENST00000609182 354 ntBASIC25.99■■□□□ 1.75
COL1A2P08123 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
COL1A2P08123 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
COL1A2P08123 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
COL1A2P08123 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.99■■□□□ 1.75
COL1A2P08123 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL1A2P08123 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
COL1A2P08123 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.98■■□□□ 1.75
COL1A2P08123 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.98■■□□□ 1.75
COL1A2P08123 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL1A2P08123 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL1A2P08123 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL1A2P08123 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.97■■□□□ 1.75
COL1A2P08123 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL1A2P08123 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL1A2P08123 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL1A2P08123 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL1A2P08123 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
COL1A2P08123 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
COL1A2P08123 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.97■■□□□ 1.75
COL1A2P08123 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL1A2P08123 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
COL1A2P08123 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.96■■□□□ 1.75
COL1A2P08123 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
COL1A2P08123 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.96■■□□□ 1.75
COL1A2P08123 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
COL1A2P08123 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.95■■□□□ 1.75
COL1A2P08123 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
COL1A2P08123 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
COL1A2P08123 MIR6724-1-201ENST00000616420 92 ntBASIC25.95■■□□□ 1.74
COL1A2P08123 MIR6724-2-201ENST00000616483 92 ntBASIC25.95■■□□□ 1.74
COL1A2P08123 MIR6724-4-201ENST00000617390 92 ntBASIC25.95■■□□□ 1.74
COL1A2P08123 MIR6724-3-201ENST00000622482 92 ntBASIC25.95■■□□□ 1.74
COL1A2P08123 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
COL1A2P08123 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL1A2P08123 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.94■■□□□ 1.74
COL1A2P08123 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.94■■□□□ 1.74
COL1A2P08123 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.94■■□□□ 1.74
COL1A2P08123 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.94■■□□□ 1.74
COL1A2P08123 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
COL1A2P08123 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
COL1A2P08123 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL1A2P08123 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL1A2P08123 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
COL1A2P08123 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.93■■□□□ 1.74
COL1A2P08123 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.93■■□□□ 1.74
COL1A2P08123 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.92■■□□□ 1.74
COL1A2P08123 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL1A2P08123 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL1A2P08123 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
COL1A2P08123 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.92■■□□□ 1.74
COL1A2P08123 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.92■■□□□ 1.74
COL1A2P08123 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL1A2P08123 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL1A2P08123 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL1A2P08123 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL1A2P08123 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
COL1A2P08123 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL1A2P08123 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL1A2P08123 AC091060.1-201ENST00000623524 1766 ntBASIC25.91■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms