Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
SNRNP200O75643 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SNRNP200O75643 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.62■■□□□ 1.21
SNRNP200O75643 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.62■■□□□ 1.21
SNRNP200O75643 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNRNP200O75643 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNRNP200O75643 AC011551.1-201ENST00000614101 683 ntBASIC22.62■■□□□ 1.21
SNRNP200O75643 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNRNP200O75643 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SNRNP200O75643 KRT18P24-201ENST00000344739 1156 ntBASIC22.61■■□□□ 1.21
SNRNP200O75643 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SNRNP200O75643 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SNRNP200O75643 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.61■■□□□ 1.21
SNRNP200O75643 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.61■■□□□ 1.21
SNRNP200O75643 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SNRNP200O75643 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
SNRNP200O75643 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.6■■□□□ 1.21
SNRNP200O75643 AL592295.1-201ENST00000400984 884 ntBASIC22.6■■□□□ 1.21
SNRNP200O75643 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SNRNP200O75643 AC022211.4-201ENST00000625094 2161 ntBASIC22.6■■□□□ 1.21
SNRNP200O75643 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SNRNP200O75643 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
SNRNP200O75643 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNRNP200O75643 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNRNP200O75643 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.59■■□□□ 1.21
SNRNP200O75643 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNRNP200O75643 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.59■■□□□ 1.21
SNRNP200O75643 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.59■■□□□ 1.21
SNRNP200O75643 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SNRNP200O75643 AC120024.1-201ENST00000562672 995 ntBASIC22.58■■□□□ 1.21
SNRNP200O75643 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.58■■□□□ 1.21
SNRNP200O75643 THA1P-201ENST00000590384 1145 ntBASIC22.58■■□□□ 1.21
SNRNP200O75643 AL031848.2-201ENST00000607670 837 ntBASIC22.58■■□□□ 1.21
SNRNP200O75643 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.58■■□□□ 1.21
SNRNP200O75643 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SNRNP200O75643 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SNRNP200O75643 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SNRNP200O75643 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
SNRNP200O75643 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
SNRNP200O75643 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SNRNP200O75643 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.57■■□□□ 1.2
SNRNP200O75643 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SNRNP200O75643 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SNRNP200O75643 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
SNRNP200O75643 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SNRNP200O75643 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SNRNP200O75643 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SNRNP200O75643 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
SNRNP200O75643 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.57■■□□□ 1.2
SNRNP200O75643 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.57■■□□□ 1.2
SNRNP200O75643 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
SNRNP200O75643 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SNRNP200O75643 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SNRNP200O75643 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.56■■□□□ 1.2
SNRNP200O75643 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SNRNP200O75643 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SNRNP200O75643 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.55■■□□□ 1.2
SNRNP200O75643 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.55■■□□□ 1.2
SNRNP200O75643 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.55■■□□□ 1.2
SNRNP200O75643 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SNRNP200O75643 Z92544.1-202ENST00000571933 1220 ntBASIC22.55■■□□□ 1.2
SNRNP200O75643 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
SNRNP200O75643 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
SNRNP200O75643 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SNRNP200O75643 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SNRNP200O75643 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
SNRNP200O75643 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SNRNP200O75643 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
SNRNP200O75643 AF131216.4-201ENST00000638924 1588 ntBASIC22.54■■□□□ 1.2
SNRNP200O75643 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SNRNP200O75643 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SNRNP200O75643 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.54■■□□□ 1.2
SNRNP200O75643 BX664725.1-201ENST00000438252 379 ntBASIC22.54■■□□□ 1.2
SNRNP200O75643 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.54■■□□□ 1.2
SNRNP200O75643 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SNRNP200O75643 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SNRNP200O75643 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SNRNP200O75643 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SNRNP200O75643 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SNRNP200O75643 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SNRNP200O75643 GUSBP5-201ENST00000418136 578 ntBASIC22.53■■□□□ 1.2
SNRNP200O75643 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.53■■□□□ 1.2
SNRNP200O75643 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.53■■□□□ 1.2
SNRNP200O75643 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.52■■□□□ 1.2
SNRNP200O75643 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SNRNP200O75643 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.52■■□□□ 1.2
SNRNP200O75643 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.52■■□□□ 1.2
SNRNP200O75643 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.52■■□□□ 1.2
SNRNP200O75643 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SNRNP200O75643 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SNRNP200O75643 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.52■■□□□ 1.2
SNRNP200O75643 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SNRNP200O75643 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SNRNP200O75643 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
SNRNP200O75643 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.51■■□□□ 1.19
SNRNP200O75643 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
SNRNP200O75643 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SNRNP200O75643 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SNRNP200O75643 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SNRNP200O75643 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms