Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LYRM1O43325 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LYRM1O43325 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LYRM1O43325 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LYRM1O43325 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.18■□□□□ 0.82
LYRM1O43325 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LYRM1O43325 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LYRM1O43325 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.18■□□□□ 0.82
LYRM1O43325 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LYRM1O43325 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LYRM1O43325 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LYRM1O43325 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LYRM1O43325 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.17■□□□□ 0.82
LYRM1O43325 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LYRM1O43325 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.17■□□□□ 0.82
LYRM1O43325 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LYRM1O43325 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
LYRM1O43325 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LYRM1O43325 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LYRM1O43325 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.16■□□□□ 0.82
LYRM1O43325 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LYRM1O43325 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
LYRM1O43325 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.16■□□□□ 0.82
LYRM1O43325 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.16■□□□□ 0.82
LYRM1O43325 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LYRM1O43325 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LYRM1O43325 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
LYRM1O43325 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LYRM1O43325 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
LYRM1O43325 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LYRM1O43325 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LYRM1O43325 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.15■□□□□ 0.82
LYRM1O43325 SETD8P1-201ENST00000623146 1180 ntBASIC20.15■□□□□ 0.82
LYRM1O43325 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LYRM1O43325 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LYRM1O43325 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.15■□□□□ 0.82
LYRM1O43325 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
LYRM1O43325 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LYRM1O43325 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.15■□□□□ 0.82
LYRM1O43325 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LYRM1O43325 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.14■□□□□ 0.81
LYRM1O43325 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LYRM1O43325 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.14■□□□□ 0.81
LYRM1O43325 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
LYRM1O43325 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LYRM1O43325 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.13■□□□□ 0.81
LYRM1O43325 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.13■□□□□ 0.81
LYRM1O43325 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LYRM1O43325 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LYRM1O43325 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LYRM1O43325 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LYRM1O43325 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.12■□□□□ 0.81
LYRM1O43325 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.12■□□□□ 0.81
LYRM1O43325 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LYRM1O43325 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LYRM1O43325 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LYRM1O43325 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.12■□□□□ 0.81
LYRM1O43325 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LYRM1O43325 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LYRM1O43325 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LYRM1O43325 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LYRM1O43325 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LYRM1O43325 AC108673.1-201ENST00000510422 1159 ntBASIC20.11■□□□□ 0.81
LYRM1O43325 AC137767.1-201ENST00000602918 1920 ntBASIC20.11■□□□□ 0.81
LYRM1O43325 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.11■□□□□ 0.81
LYRM1O43325 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LYRM1O43325 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LYRM1O43325 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LYRM1O43325 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.11■□□□□ 0.81
LYRM1O43325 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LYRM1O43325 C1orf229-201ENST00000623686 2258 ntBASIC20.1■□□□□ 0.81
LYRM1O43325 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
LYRM1O43325 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.1■□□□□ 0.81
LYRM1O43325 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.1■□□□□ 0.81
LYRM1O43325 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYRM1O43325 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYRM1O43325 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LYRM1O43325 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.1■□□□□ 0.81
LYRM1O43325 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYRM1O43325 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYRM1O43325 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYRM1O43325 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYRM1O43325 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LYRM1O43325 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.09■□□□□ 0.81
LYRM1O43325 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.09■□□□□ 0.81
LYRM1O43325 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LYRM1O43325 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
LYRM1O43325 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
LYRM1O43325 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
LYRM1O43325 LINC00526-201ENST00000581067 1875 ntBASIC20.08■□□□□ 0.81
LYRM1O43325 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LYRM1O43325 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LYRM1O43325 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LYRM1O43325 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
LYRM1O43325 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.07■□□□□ 0.8
LYRM1O43325 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LYRM1O43325 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
LYRM1O43325 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LYRM1O43325 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LYRM1O43325 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms