Protein–RNA interactions for Protein: P39962

YCK3, Casein kinase I homolog 3, yeastyeast

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YCK3P39962 TRM10YOL093W 882 nt15.56■□□□□ 0.08
YCK3P39962 PCL6YER059W 1263 nt15.53■□□□□ 0.08
YCK3P39962 SUT1YGL162W 900 nt15.53■□□□□ 0.08
YCK3P39962 UBC12YLR306W 567 nt15.53■□□□□ 0.08
YCK3P39962 VHS2YIL135C 1311 nt15.52■□□□□ 0.08
YCK3P39962 YPR1YDR368W 939 nt15.52■□□□□ 0.08
YCK3P39962 ECM9YKR004C 1134 nt15.52■□□□□ 0.08
YCK3P39962 RSA3YLR221C 663 nt15.51■□□□□ 0.07
YCK3P39962 HMRA1YCR097W 381 nt15.5■□□□□ 0.07
YCK3P39962 ARC19YKL013C 516 nt15.5■□□□□ 0.07
YCK3P39962 FTR1YER145C 1215 nt15.49■□□□□ 0.07
YCK3P39962 MOB1YIL106W 945 nt15.48■□□□□ 0.07
YCK3P39962 SUT2YPR009W 807 nt15.45■□□□□ 0.06
YCK3P39962 COX3Q0275 810 nt15.44■□□□□ 0.06
YCK3P39962 HMT1YBR034C 1047 nt15.41■□□□□ 0.06
YCK3P39962 TSR2YLR435W 618 nt15.38■□□□□ 0.05
YCK3P39962 RUF21RUF21 707 nt15.38■□□□□ 0.05
YCK3P39962 YMR187CYMR187C 1296 nt15.36■□□□□ 0.05
YCK3P39962 tR(UCU)Q1tR(UCU)Q1 73 nt15.35■□□□□ 0.05
YCK3P39962 YEL009C-AYEL009C-A 408 nt15.34■□□□□ 0.05
YCK3P39962 CSI1YMR025W 888 nt15.34■□□□□ 0.05
YCK3P39962 MDJ1YFL016C 1536 nt15.33■□□□□ 0.05
YCK3P39962 YPL071CYPL071C 471 nt15.32■□□□□ 0.04
YCK3P39962 LSM12YHR121W 564 nt15.3■□□□□ 0.04
YCK3P39962 VPS28YPL065W 729 nt15.28■□□□□ 0.04
YCK3P39962 IZH4YOL101C 939 nt15.27■□□□□ 0.04
YCK3P39962 TOM20YGR082W 552 nt15.26■□□□□ 0.03
YCK3P39962 YGR168CYGR168C 1131 nt15.25■□□□□ 0.03
YCK3P39962 TAZ1YPR140W 1146 nt15.25■□□□□ 0.03
YCK3P39962 YFR045WYFR045W 930 nt15.24■□□□□ 0.03
YCK3P39962 SRT1YMR101C 1032 nt15.24■□□□□ 0.03
YCK3P39962 INM2YDR287W 879 nt15.22■□□□□ 0.03
YCK3P39962 YML079WYML079W 606 nt15.21■□□□□ 0.03
YCK3P39962 RXT2YBR095C 1293 nt15.21■□□□□ 0.03
YCK3P39962 ERG12YMR208W 1332 nt15.2■□□□□ 0.02
YCK3P39962 MSA2YKR077W 1092 nt15.2■□□□□ 0.02
YCK3P39962 VAC17YCL063W 1272 nt15.19■□□□□ 0.02
YCK3P39962 PRM4YPL156C 855 nt15.19■□□□□ 0.02
YCK3P39962 YBR292CYBR292C 372 nt15.19■□□□□ 0.02
YCK3P39962 YIF1YNL263C 945 nt15.14■□□□□ 0.01
YCK3P39962 BTT1YDR252W 450 nt15.13■□□□□ 0.01
YCK3P39962 LIP2YLR239C 987 nt15.13■□□□□ 0.01
YCK3P39962 ARP6YLR085C 1317 nt15.12■□□□□ 0.01
YCK3P39962 YEL074WYEL074W 339 nt15.1■□□□□ 0.01
YCK3P39962 RRF1YHR038W 693 nt15.1■□□□□ 0.01
YCK3P39962 DIA1YMR316W 1011 nt15.08■□□□□ 0
YCK3P39962 YDL158CYDL158C 309 nt15.06■□□□□ 0
YCK3P39962 IRC9YJL142C 393 nt15.06■□□□□ 0
YCK3P39962 YNL303WYNL303W 348 nt15.06■□□□□ 0
YCK3P39962 YDL157CYDL157C 357 nt15.05■□□□□ -0
YCK3P39962 SPO16YHR153C 597 nt15.05■□□□□ -0
YCK3P39962 YJL107CYJL107C 1164 nt15.05■□□□□ -0
YCK3P39962 OSW1YOR255W 837 nt15.05■□□□□ -0
YCK3P39962 END3YNL084C 1050 nt15.04■□□□□ -0
YCK3P39962 LEU2YCL018W 1095 nt15.04■□□□□ -0
YCK3P39962 DAL2YIR029W 1032 nt15.02■□□□□ -0
YCK3P39962 RPI1YIL119C 1224 nt15.01□□□□□ -0.01
YCK3P39962 COG5YNL051W 1212 nt15.01□□□□□ -0.01
YCK3P39962 Q0032Q0032 291 nt14.99□□□□□ -0.01
YCK3P39962 CTK2YJL006C 972 nt14.99□□□□□ -0.01
YCK3P39962 YOL106WYOL106W 354 nt14.99□□□□□ -0.01
YCK3P39962 OAZ1YPL052W 879 nt14.99□□□□□ -0.01
YCK3P39962 THI80YOR143C 960 nt14.97□□□□□ -0.01
YCK3P39962 RSM23YGL129C 1353 nt14.97□□□□□ -0.01
YCK3P39962 YLH47YPR125W 1365 nt14.97□□□□□ -0.01
YCK3P39962 ADK2YER170W 678 nt14.96□□□□□ -0.01
YCK3P39962 RRT6YGL146C 936 nt14.94□□□□□ -0.02
YCK3P39962 TVP38YKR088C 1014 nt14.94□□□□□ -0.02
YCK3P39962 OCA4YCR095C 1089 nt14.92□□□□□ -0.02
YCK3P39962 KRE28YDR532C 1158 nt14.91□□□□□ -0.02
YCK3P39962 MTC7YEL033W 420 nt14.91□□□□□ -0.02
YCK3P39962 YOL107WYOL107W 1029 nt14.91□□□□□ -0.02
YCK3P39962 GCN5YGR252W 1320 nt14.91□□□□□ -0.02
YCK3P39962 SED5YLR026C 1023 nt14.9□□□□□ -0.02
YCK3P39962 MPC1YGL080W 393 nt14.89□□□□□ -0.03
YCK3P39962 YMR306C-AYMR306C-A 390 nt14.89□□□□□ -0.03
YCK3P39962 THP3YPR045C 1413 nt14.89□□□□□ -0.03
YCK3P39962 snR189snR189 189 nt14.88□□□□□ -0.03
YCK3P39962 NCE102YPR149W 522 nt14.87□□□□□ -0.03
YCK3P39962 PTI1YGR156W 1278 nt14.86□□□□□ -0.03
YCK3P39962 NUR1YDL089W 1455 nt14.86□□□□□ -0.03
YCK3P39962 POP6YGR030C 477 nt14.85□□□□□ -0.03
YCK3P39962 YNL143CYNL143C 393 nt14.85□□□□□ -0.03
YCK3P39962 SLX1YBR228W 915 nt14.85□□□□□ -0.03
YCK3P39962 PEX34YCL056C 435 nt14.85□□□□□ -0.03
YCK3P39962 Q0297Q0297 156 nt14.84□□□□□ -0.03
YCK3P39962 snR56snR56 88 nt14.83□□□□□ -0.04
YCK3P39962 RPN9YDR427W 1182 nt14.83□□□□□ -0.04
YCK3P39962 ERJ5YFR041C 888 nt14.83□□□□□ -0.04
YCK3P39962 SLI1YGR212W 1407 nt14.83□□□□□ -0.04
YCK3P39962 RRS1YOR294W 612 nt14.82□□□□□ -0.04
YCK3P39962 RRP15YPR143W 753 nt14.8□□□□□ -0.04
YCK3P39962 SRX1YKL086W 384 nt14.79□□□□□ -0.04
YCK3P39962 YOR105WYOR105W 327 nt14.79□□□□□ -0.04
YCK3P39962 YLR311CYLR311C 348 nt14.78□□□□□ -0.04
YCK3P39962 YML099W-AYML099W-A 330 nt14.77□□□□□ -0.05
YCK3P39962 HAT1YPL001W 1125 nt14.77□□□□□ -0.05
YCK3P39962 VPS20YMR077C 666 nt14.76□□□□□ -0.05
YCK3P39962 SHE9YDR393W 1371 nt14.75□□□□□ -0.05
YCK3P39962 CSL4YNL232W 879 nt14.74□□□□□ -0.05
Retrieved 100 of 7,029 protein–RNA pairs in 33.8 ms