Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC30.49■■■□□ 2.47
PDZRN3Q9UPQ7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
PDZRN3Q9UPQ7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
PDZRN3Q9UPQ7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
PDZRN3Q9UPQ7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
PDZRN3Q9UPQ7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PDZRN3Q9UPQ7 MIR935-201ENST00000401179 91 ntBASIC30.48■■■□□ 2.47
PDZRN3Q9UPQ7 BX664725.1-201ENST00000438252 379 ntBASIC30.48■■■□□ 2.47
PDZRN3Q9UPQ7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
PDZRN3Q9UPQ7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC30.48■■■□□ 2.47
PDZRN3Q9UPQ7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
PDZRN3Q9UPQ7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC30.47■■■□□ 2.47
PDZRN3Q9UPQ7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC30.47■■■□□ 2.47
PDZRN3Q9UPQ7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC30.47■■■□□ 2.47
PDZRN3Q9UPQ7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
PDZRN3Q9UPQ7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC30.46■■■□□ 2.47
PDZRN3Q9UPQ7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
PDZRN3Q9UPQ7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC30.46■■■□□ 2.47
PDZRN3Q9UPQ7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC30.46■■■□□ 2.47
PDZRN3Q9UPQ7 MIR4787-201ENST00000607364 84 ntBASIC30.46■■■□□ 2.47
PDZRN3Q9UPQ7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
PDZRN3Q9UPQ7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
PDZRN3Q9UPQ7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.46
PDZRN3Q9UPQ7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.46
PDZRN3Q9UPQ7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
PDZRN3Q9UPQ7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
PDZRN3Q9UPQ7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
PDZRN3Q9UPQ7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC30.44■■■□□ 2.46
PDZRN3Q9UPQ7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC30.44■■■□□ 2.46
PDZRN3Q9UPQ7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
PDZRN3Q9UPQ7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
PDZRN3Q9UPQ7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
PDZRN3Q9UPQ7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
PDZRN3Q9UPQ7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PDZRN3Q9UPQ7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PDZRN3Q9UPQ7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
PDZRN3Q9UPQ7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
PDZRN3Q9UPQ7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
PDZRN3Q9UPQ7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
PDZRN3Q9UPQ7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC30.43■■■□□ 2.46
PDZRN3Q9UPQ7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
PDZRN3Q9UPQ7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC30.42■■■□□ 2.46
PDZRN3Q9UPQ7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
PDZRN3Q9UPQ7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
PDZRN3Q9UPQ7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC30.42■■■□□ 2.46
PDZRN3Q9UPQ7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC30.42■■■□□ 2.46
PDZRN3Q9UPQ7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.42■■■□□ 2.46
PDZRN3Q9UPQ7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
PDZRN3Q9UPQ7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
PDZRN3Q9UPQ7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
PDZRN3Q9UPQ7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC30.41■■■□□ 2.46
PDZRN3Q9UPQ7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
PDZRN3Q9UPQ7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
PDZRN3Q9UPQ7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
PDZRN3Q9UPQ7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC30.39■■■□□ 2.46
PDZRN3Q9UPQ7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC30.39■■■□□ 2.46
PDZRN3Q9UPQ7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC30.39■■■□□ 2.46
PDZRN3Q9UPQ7 KRT18P24-201ENST00000344739 1156 ntBASIC30.38■■■□□ 2.45
PDZRN3Q9UPQ7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC30.38■■■□□ 2.45
PDZRN3Q9UPQ7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC30.38■■■□□ 2.45
PDZRN3Q9UPQ7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
PDZRN3Q9UPQ7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
PDZRN3Q9UPQ7 AC010501.1-201ENST00000606270 1962 ntBASIC30.37■■■□□ 2.45
PDZRN3Q9UPQ7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
PDZRN3Q9UPQ7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC30.37■■■□□ 2.45
PDZRN3Q9UPQ7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC30.37■■■□□ 2.45
PDZRN3Q9UPQ7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
PDZRN3Q9UPQ7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC30.37■■■□□ 2.45
PDZRN3Q9UPQ7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
PDZRN3Q9UPQ7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PDZRN3Q9UPQ7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
PDZRN3Q9UPQ7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PDZRN3Q9UPQ7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
PDZRN3Q9UPQ7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
PDZRN3Q9UPQ7 UNC93B8-201ENST00000511903 705 ntBASIC30.35■■■□□ 2.45
PDZRN3Q9UPQ7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
PDZRN3Q9UPQ7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
PDZRN3Q9UPQ7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
PDZRN3Q9UPQ7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
PDZRN3Q9UPQ7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
PDZRN3Q9UPQ7 KRT16P3-201ENST00000439127 1283 ntBASIC30.34■■■□□ 2.45
PDZRN3Q9UPQ7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC30.34■■■□□ 2.45
PDZRN3Q9UPQ7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PDZRN3Q9UPQ7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC30.33■■■□□ 2.45
PDZRN3Q9UPQ7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
PDZRN3Q9UPQ7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PDZRN3Q9UPQ7 AC137630.3-201ENST00000607245 391 ntBASIC30.32■■■□□ 2.44
PDZRN3Q9UPQ7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PDZRN3Q9UPQ7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PDZRN3Q9UPQ7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC30.31■■■□□ 2.44
PDZRN3Q9UPQ7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC30.31■■■□□ 2.44
PDZRN3Q9UPQ7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PDZRN3Q9UPQ7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
PDZRN3Q9UPQ7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
PDZRN3Q9UPQ7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PDZRN3Q9UPQ7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PDZRN3Q9UPQ7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
PDZRN3Q9UPQ7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PDZRN3Q9UPQ7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PDZRN3Q9UPQ7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC30.3■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms