Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KRCC1Q9NPI7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
KRCC1Q9NPI7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.55■■□□□ 1.04
KRCC1Q9NPI7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.55■■□□□ 1.04
KRCC1Q9NPI7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.55■■□□□ 1.04
KRCC1Q9NPI7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KRCC1Q9NPI7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.55■■□□□ 1.04
KRCC1Q9NPI7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KRCC1Q9NPI7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KRCC1Q9NPI7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KRCC1Q9NPI7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KRCC1Q9NPI7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.55■■□□□ 1.04
KRCC1Q9NPI7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KRCC1Q9NPI7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.55■■□□□ 1.04
KRCC1Q9NPI7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
KRCC1Q9NPI7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
KRCC1Q9NPI7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
KRCC1Q9NPI7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.54■■□□□ 1.04
KRCC1Q9NPI7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.54■■□□□ 1.04
KRCC1Q9NPI7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
KRCC1Q9NPI7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
KRCC1Q9NPI7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KRCC1Q9NPI7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KRCC1Q9NPI7 LINC00543-201ENST00000567234 1845 ntBASIC21.53■■□□□ 1.04
KRCC1Q9NPI7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KRCC1Q9NPI7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KRCC1Q9NPI7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
KRCC1Q9NPI7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KRCC1Q9NPI7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KRCC1Q9NPI7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KRCC1Q9NPI7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KRCC1Q9NPI7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
KRCC1Q9NPI7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
KRCC1Q9NPI7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
KRCC1Q9NPI7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KRCC1Q9NPI7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
KRCC1Q9NPI7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
KRCC1Q9NPI7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.51■■□□□ 1.03
KRCC1Q9NPI7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.51■■□□□ 1.03
KRCC1Q9NPI7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
KRCC1Q9NPI7 ECEL1P2-201ENST00000461596 1295 ntBASIC21.51■■□□□ 1.03
KRCC1Q9NPI7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.51■■□□□ 1.03
KRCC1Q9NPI7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KRCC1Q9NPI7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KRCC1Q9NPI7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRCC1Q9NPI7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRCC1Q9NPI7 RP9P-202ENST00000450133 1212 ntBASIC21.5■■□□□ 1.03
KRCC1Q9NPI7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KRCC1Q9NPI7 AC092296.2-201ENST00000589470 999 ntBASIC21.5■■□□□ 1.03
KRCC1Q9NPI7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRCC1Q9NPI7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRCC1Q9NPI7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.5■■□□□ 1.03
KRCC1Q9NPI7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KRCC1Q9NPI7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRCC1Q9NPI7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
KRCC1Q9NPI7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KRCC1Q9NPI7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRCC1Q9NPI7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KRCC1Q9NPI7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRCC1Q9NPI7 KRT18P10-201ENST00000388836 1287 ntBASIC21.49■■□□□ 1.03
KRCC1Q9NPI7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRCC1Q9NPI7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRCC1Q9NPI7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRCC1Q9NPI7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.48■■□□□ 1.03
KRCC1Q9NPI7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRCC1Q9NPI7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.48■■□□□ 1.03
KRCC1Q9NPI7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRCC1Q9NPI7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.48■■□□□ 1.03
KRCC1Q9NPI7 MIR7108-201ENST00000614319 87 ntBASIC21.48■■□□□ 1.03
KRCC1Q9NPI7 MIR6089-201ENST00000616698 64 ntBASIC21.48■■□□□ 1.03
KRCC1Q9NPI7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
KRCC1Q9NPI7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRCC1Q9NPI7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRCC1Q9NPI7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.47■■□□□ 1.03
KRCC1Q9NPI7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRCC1Q9NPI7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.47■■□□□ 1.03
KRCC1Q9NPI7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRCC1Q9NPI7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRCC1Q9NPI7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KRCC1Q9NPI7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KRCC1Q9NPI7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRCC1Q9NPI7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRCC1Q9NPI7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRCC1Q9NPI7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.46■■□□□ 1.03
KRCC1Q9NPI7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRCC1Q9NPI7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRCC1Q9NPI7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.46■■□□□ 1.03
KRCC1Q9NPI7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.46■■□□□ 1.03
KRCC1Q9NPI7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRCC1Q9NPI7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
KRCC1Q9NPI7 MIR639-201ENST00000384974 98 ntBASIC21.45■■□□□ 1.02
KRCC1Q9NPI7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRCC1Q9NPI7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
KRCC1Q9NPI7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
KRCC1Q9NPI7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
KRCC1Q9NPI7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
KRCC1Q9NPI7 AC022413.1-201ENST00000624602 984 ntBASIC21.44■■□□□ 1.02
KRCC1Q9NPI7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
KRCC1Q9NPI7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
KRCC1Q9NPI7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms