Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC13.99□□□□□ -0.17
CYSTM1Q9H1C7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC13.99□□□□□ -0.17
CYSTM1Q9H1C7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC13.99□□□□□ -0.17
CYSTM1Q9H1C7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CYSTM1Q9H1C7 AC096887.2-201ENST00000623443 1957 ntBASIC13.99□□□□□ -0.17
CYSTM1Q9H1C7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CYSTM1Q9H1C7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC13.99□□□□□ -0.17
CYSTM1Q9H1C7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CYSTM1Q9H1C7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CYSTM1Q9H1C7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CYSTM1Q9H1C7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CYSTM1Q9H1C7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CYSTM1Q9H1C7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC13.98□□□□□ -0.17
CYSTM1Q9H1C7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CYSTM1Q9H1C7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CYSTM1Q9H1C7 LINC00526-201ENST00000581067 1875 ntBASIC13.98□□□□□ -0.17
CYSTM1Q9H1C7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC13.98□□□□□ -0.17
CYSTM1Q9H1C7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CYSTM1Q9H1C7 NFE2L3P1-201ENST00000588207 1959 ntBASIC13.98□□□□□ -0.17
CYSTM1Q9H1C7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CYSTM1Q9H1C7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CYSTM1Q9H1C7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CYSTM1Q9H1C7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CYSTM1Q9H1C7 WHAMMP2-203ENST00000563942 1603 ntBASIC13.97□□□□□ -0.17
CYSTM1Q9H1C7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CYSTM1Q9H1C7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC13.97□□□□□ -0.17
CYSTM1Q9H1C7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CYSTM1Q9H1C7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CYSTM1Q9H1C7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CYSTM1Q9H1C7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC13.97□□□□□ -0.17
CYSTM1Q9H1C7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC13.97□□□□□ -0.17
CYSTM1Q9H1C7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC13.97□□□□□ -0.17
CYSTM1Q9H1C7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
CYSTM1Q9H1C7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CYSTM1Q9H1C7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CYSTM1Q9H1C7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CYSTM1Q9H1C7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CYSTM1Q9H1C7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
CYSTM1Q9H1C7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
CYSTM1Q9H1C7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CYSTM1Q9H1C7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC13.96□□□□□ -0.17
CYSTM1Q9H1C7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC13.96□□□□□ -0.17
CYSTM1Q9H1C7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CYSTM1Q9H1C7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.95□□□□□ -0.18
CYSTM1Q9H1C7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC13.95□□□□□ -0.18
CYSTM1Q9H1C7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CYSTM1Q9H1C7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CYSTM1Q9H1C7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CYSTM1Q9H1C7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CYSTM1Q9H1C7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CYSTM1Q9H1C7 WHAMMP3-201ENST00000611636 1609 ntBASIC13.95□□□□□ -0.18
CYSTM1Q9H1C7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC13.95□□□□□ -0.18
CYSTM1Q9H1C7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CYSTM1Q9H1C7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CYSTM1Q9H1C7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CYSTM1Q9H1C7 AC127496.7-201ENST00000625110 1798 ntBASIC13.94□□□□□ -0.18
CYSTM1Q9H1C7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CYSTM1Q9H1C7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CYSTM1Q9H1C7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CYSTM1Q9H1C7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CYSTM1Q9H1C7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC13.94□□□□□ -0.18
CYSTM1Q9H1C7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CYSTM1Q9H1C7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CYSTM1Q9H1C7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CYSTM1Q9H1C7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CYSTM1Q9H1C7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC13.93□□□□□ -0.18
CYSTM1Q9H1C7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
CYSTM1Q9H1C7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CYSTM1Q9H1C7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CYSTM1Q9H1C7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC13.93□□□□□ -0.18
CYSTM1Q9H1C7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CYSTM1Q9H1C7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CYSTM1Q9H1C7 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CYSTM1Q9H1C7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CYSTM1Q9H1C7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CYSTM1Q9H1C7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CYSTM1Q9H1C7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC13.93□□□□□ -0.18
CYSTM1Q9H1C7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CYSTM1Q9H1C7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CYSTM1Q9H1C7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CYSTM1Q9H1C7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CYSTM1Q9H1C7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CYSTM1Q9H1C7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CYSTM1Q9H1C7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CYSTM1Q9H1C7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CYSTM1Q9H1C7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CYSTM1Q9H1C7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC13.92□□□□□ -0.18
CYSTM1Q9H1C7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CYSTM1Q9H1C7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CYSTM1Q9H1C7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CYSTM1Q9H1C7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CYSTM1Q9H1C7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
CYSTM1Q9H1C7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CYSTM1Q9H1C7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CYSTM1Q9H1C7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CYSTM1Q9H1C7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CYSTM1Q9H1C7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CYSTM1Q9H1C7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
CYSTM1Q9H1C7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CYSTM1Q9H1C7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms