Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.33■■□□□ 1
GCN1Q92616 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GCN1Q92616 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
GCN1Q92616 MIR4767-201ENST00000582827 78 ntBASIC21.32■■□□□ 1
GCN1Q92616 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.32■■□□□ 1
GCN1Q92616 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC21.32■■□□□ 1
GCN1Q92616 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GCN1Q92616 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GCN1Q92616 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.32■■□□□ 1
GCN1Q92616 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GCN1Q92616 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.31■■□□□ 1
GCN1Q92616 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.31■■□□□ 1
GCN1Q92616 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.31■■□□□ 1
GCN1Q92616 AC104771.1-201ENST00000603335 964 ntBASIC21.31■■□□□ 1
GCN1Q92616 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.31■■□□□ 1
GCN1Q92616 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.3■■□□□ 1
GCN1Q92616 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.3■■□□□ 1
GCN1Q92616 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.3■■□□□ 1
GCN1Q92616 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
GCN1Q92616 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC21.3■■□□□ 1
GCN1Q92616 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GCN1Q92616 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.29■■□□□ 1
GCN1Q92616 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.29■■□□□ 1
GCN1Q92616 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.29■■□□□ 1
GCN1Q92616 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
GCN1Q92616 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.29■■□□□ 1
GCN1Q92616 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
GCN1Q92616 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.28■■□□□ 1
GCN1Q92616 AC100797.4-201ENST00000631653 1827 ntBASIC21.28■■□□□ 1
GCN1Q92616 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GCN1Q92616 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
GCN1Q92616 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
GCN1Q92616 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
GCN1Q92616 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
GCN1Q92616 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.27■■□□□ 1
GCN1Q92616 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
GCN1Q92616 AC011551.1-201ENST00000614101 683 ntBASIC21.27■■□□□ 1
GCN1Q92616 YBX1P1-201ENST00000445822 960 ntBASIC21.26■□□□□ 0.99
GCN1Q92616 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.26■□□□□ 0.99
GCN1Q92616 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GCN1Q92616 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.25■□□□□ 0.99
GCN1Q92616 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.25■□□□□ 0.99
GCN1Q92616 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.25■□□□□ 0.99
GCN1Q92616 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.25■□□□□ 0.99
GCN1Q92616 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.25■□□□□ 0.99
GCN1Q92616 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
GCN1Q92616 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.25■□□□□ 0.99
GCN1Q92616 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GCN1Q92616 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GCN1Q92616 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GCN1Q92616 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.25■□□□□ 0.99
GCN1Q92616 AC241377.3-202ENST00000626088 1088 ntBASIC21.25■□□□□ 0.99
GCN1Q92616 AC241585.3-202ENST00000628937 1088 ntBASIC21.25■□□□□ 0.99
GCN1Q92616 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GCN1Q92616 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
GCN1Q92616 AC004448.1-201ENST00000458332 883 ntBASIC21.24■□□□□ 0.99
GCN1Q92616 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
GCN1Q92616 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GCN1Q92616 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.24■□□□□ 0.99
GCN1Q92616 TSPY20P-201ENST00000450910 630 ntBASIC21.24■□□□□ 0.99
GCN1Q92616 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.24■□□□□ 0.99
GCN1Q92616 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.24■□□□□ 0.99
GCN1Q92616 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.24■□□□□ 0.99
GCN1Q92616 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GCN1Q92616 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
GCN1Q92616 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
GCN1Q92616 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
GCN1Q92616 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
GCN1Q92616 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
GCN1Q92616 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GCN1Q92616 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GCN1Q92616 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GCN1Q92616 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
GCN1Q92616 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GCN1Q92616 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.22■□□□□ 0.99
GCN1Q92616 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.22■□□□□ 0.99
GCN1Q92616 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.22■□□□□ 0.99
GCN1Q92616 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.22■□□□□ 0.99
GCN1Q92616 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.22■□□□□ 0.99
GCN1Q92616 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GCN1Q92616 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
GCN1Q92616 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GCN1Q92616 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GCN1Q92616 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.21■□□□□ 0.99
GCN1Q92616 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GCN1Q92616 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
GCN1Q92616 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
GCN1Q92616 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GCN1Q92616 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GCN1Q92616 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GCN1Q92616 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.19■□□□□ 0.98
GCN1Q92616 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GCN1Q92616 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.18■□□□□ 0.98
GCN1Q92616 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
GCN1Q92616 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
GCN1Q92616 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.18■□□□□ 0.98
GCN1Q92616 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.18■□□□□ 0.98
GCN1Q92616 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.18■□□□□ 0.98
GCN1Q92616 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.18■□□□□ 0.98
GCN1Q92616 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms