Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC34.39■■■■□ 3.1
CLTCL1P53675 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC34.39■■■■□ 3.1
CLTCL1P53675 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC34.38■■■■□ 3.09
CLTCL1P53675 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
CLTCL1P53675 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
CLTCL1P53675 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
CLTCL1P53675 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
CLTCL1P53675 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC34.38■■■■□ 3.09
CLTCL1P53675 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC34.36■■■■□ 3.09
CLTCL1P53675 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
CLTCL1P53675 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC34.36■■■■□ 3.09
CLTCL1P53675 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC34.35■■■■□ 3.09
CLTCL1P53675 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
CLTCL1P53675 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
CLTCL1P53675 PEMT-206ENST00000435340 960 ntTSL 5 BASIC34.35■■■■□ 3.09
CLTCL1P53675 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC34.35■■■■□ 3.09
CLTCL1P53675 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC34.35■■■■□ 3.09
CLTCL1P53675 MTDHP2-201ENST00000601468 714 ntBASIC34.35■■■■□ 3.09
CLTCL1P53675 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC34.35■■■■□ 3.09
CLTCL1P53675 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
CLTCL1P53675 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
CLTCL1P53675 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC34.35■■■■□ 3.09
CLTCL1P53675 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
CLTCL1P53675 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
CLTCL1P53675 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
CLTCL1P53675 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
CLTCL1P53675 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
CLTCL1P53675 LSM4-201ENST00000252816 986 ntTSL 2 BASIC34.33■■■■□ 3.09
CLTCL1P53675 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
CLTCL1P53675 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
CLTCL1P53675 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
CLTCL1P53675 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
CLTCL1P53675 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC34.33■■■■□ 3.09
CLTCL1P53675 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC34.32■■■■□ 3.08
CLTCL1P53675 FOXO3B-201ENST00000395675 1928 ntBASIC34.32■■■■□ 3.08
CLTCL1P53675 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC34.32■■■■□ 3.08
CLTCL1P53675 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC34.32■■■■□ 3.08
CLTCL1P53675 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC34.32■■■■□ 3.08
CLTCL1P53675 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC34.32■■■■□ 3.08
CLTCL1P53675 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
CLTCL1P53675 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC34.31■■■■□ 3.08
CLTCL1P53675 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC34.31■■■■□ 3.08
CLTCL1P53675 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC34.31■■■■□ 3.08
CLTCL1P53675 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC34.31■■■■□ 3.08
CLTCL1P53675 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
CLTCL1P53675 QDPR-206ENST00000508623 601 ntTSL 3 BASIC34.31■■■■□ 3.08
CLTCL1P53675 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC34.31■■■■□ 3.08
CLTCL1P53675 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC34.3■■■■□ 3.08
CLTCL1P53675 AL512631.2-201ENST00000604634 923 ntBASIC34.3■■■■□ 3.08
CLTCL1P53675 MIR6724-1-201ENST00000616420 92 ntBASIC34.3■■■■□ 3.08
CLTCL1P53675 MIR6724-2-201ENST00000616483 92 ntBASIC34.3■■■■□ 3.08
CLTCL1P53675 MIR6724-4-201ENST00000617390 92 ntBASIC34.3■■■■□ 3.08
CLTCL1P53675 MIR6724-3-201ENST00000622482 92 ntBASIC34.3■■■■□ 3.08
CLTCL1P53675 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
CLTCL1P53675 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
CLTCL1P53675 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
CLTCL1P53675 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC34.3■■■■□ 3.08
CLTCL1P53675 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC34.29■■■■□ 3.08
CLTCL1P53675 ERN1-208ENST00000606895 2068 ntBASIC34.29■■■■□ 3.08
CLTCL1P53675 SRR-208ENST00000576848 588 ntTSL 4 BASIC34.29■■■■□ 3.08
CLTCL1P53675 AC010997.5-201ENST00000609182 354 ntBASIC34.29■■■■□ 3.08
CLTCL1P53675 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC34.28■■■■□ 3.08
CLTCL1P53675 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
CLTCL1P53675 MIR638-201ENST00000385237 100 ntBASIC34.28■■■■□ 3.08
CLTCL1P53675 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
CLTCL1P53675 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
CLTCL1P53675 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC34.28■■■■□ 3.08
CLTCL1P53675 RPP21-222ENST00000433076 577 ntTSL 2 BASIC34.27■■■■□ 3.08
CLTCL1P53675 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC34.27■■■■□ 3.08
CLTCL1P53675 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC34.27■■■■□ 3.08
CLTCL1P53675 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
CLTCL1P53675 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
CLTCL1P53675 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC34.26■■■■□ 3.08
CLTCL1P53675 TK2-202ENST00000417693 1046 ntTSL 2 BASIC34.26■■■■□ 3.07
CLTCL1P53675 SSSCA1-AS1-201ENST00000567594 614 ntBASIC34.26■■■■□ 3.07
CLTCL1P53675 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC34.26■■■■□ 3.07
CLTCL1P53675 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
CLTCL1P53675 PKM-203ENST00000389093 2279 ntTSL 5 BASIC34.25■■■■□ 3.07
CLTCL1P53675 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
CLTCL1P53675 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
CLTCL1P53675 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
CLTCL1P53675 MIR3621-201ENST00000580529 85 ntBASIC34.25■■■■□ 3.07
CLTCL1P53675 MIR4466-201ENST00000606121 54 ntBASIC34.25■■■■□ 3.07
CLTCL1P53675 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC34.25■■■■□ 3.07
CLTCL1P53675 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
CLTCL1P53675 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC34.24■■■■□ 3.07
CLTCL1P53675 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC34.24■■■■□ 3.07
CLTCL1P53675 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC34.24■■■■□ 3.07
CLTCL1P53675 SNX5-217ENST00000606557 1087 ntBASIC34.24■■■■□ 3.07
CLTCL1P53675 EXOG-217ENST00000630638 197 ntTSL 5 BASIC34.24■■■■□ 3.07
CLTCL1P53675 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
CLTCL1P53675 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC34.23■■■■□ 3.07
CLTCL1P53675 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC34.23■■■■□ 3.07
CLTCL1P53675 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
CLTCL1P53675 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
CLTCL1P53675 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC34.22■■■■□ 3.07
CLTCL1P53675 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC34.22■■■■□ 3.07
CLTCL1P53675 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC34.22■■■■□ 3.07
CLTCL1P53675 RASSF1-AS1-201ENST00000629828 790 ntBASIC34.22■■■■□ 3.07
CLTCL1P53675 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC34.22■■■■□ 3.07
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms