Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
SRMP19623 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
SRMP19623 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
SRMP19623 DUSP8P5-201ENST00000422884 1815 ntBASIC20.57■□□□□ 0.88
SRMP19623 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRMP19623 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SRMP19623 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SRMP19623 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SRMP19623 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRMP19623 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SRMP19623 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.57■□□□□ 0.88
SRMP19623 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SRMP19623 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SRMP19623 DUX4L11-201ENST00000611504 1267 ntBASIC20.57■□□□□ 0.88
SRMP19623 DUX4L12-201ENST00000614593 1267 ntBASIC20.57■□□□□ 0.88
SRMP19623 DUX4L14-201ENST00000621227 1267 ntBASIC20.57■□□□□ 0.88
SRMP19623 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.57■□□□□ 0.88
SRMP19623 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRMP19623 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRMP19623 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SRMP19623 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.56■□□□□ 0.88
SRMP19623 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SRMP19623 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.56■□□□□ 0.88
SRMP19623 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.56■□□□□ 0.88
SRMP19623 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.56■□□□□ 0.88
SRMP19623 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRMP19623 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRMP19623 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SRMP19623 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRMP19623 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SRMP19623 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.55■□□□□ 0.88
SRMP19623 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.55■□□□□ 0.88
SRMP19623 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.55■□□□□ 0.88
SRMP19623 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.55■□□□□ 0.88
SRMP19623 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.55■□□□□ 0.88
SRMP19623 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.55■□□□□ 0.88
SRMP19623 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.55■□□□□ 0.88
SRMP19623 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRMP19623 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SRMP19623 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.54■□□□□ 0.88
SRMP19623 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRMP19623 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRMP19623 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.54■□□□□ 0.88
SRMP19623 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRMP19623 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SRMP19623 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRMP19623 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRMP19623 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.53■□□□□ 0.88
SRMP19623 AC126177.7-201ENST00000547904 679 ntBASIC20.53■□□□□ 0.88
SRMP19623 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SRMP19623 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRMP19623 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SRMP19623 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SRMP19623 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRMP19623 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.51■□□□□ 0.87
SRMP19623 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRMP19623 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRMP19623 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.51■□□□□ 0.87
SRMP19623 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRMP19623 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SRMP19623 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRMP19623 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SRMP19623 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.5■□□□□ 0.87
SRMP19623 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRMP19623 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.5■□□□□ 0.87
SRMP19623 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SRMP19623 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.5■□□□□ 0.87
SRMP19623 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SRMP19623 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRMP19623 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
SRMP19623 ABCB10P4-201ENST00000566803 2184 ntBASIC20.49■□□□□ 0.87
SRMP19623 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SRMP19623 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.49■□□□□ 0.87
SRMP19623 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.49■□□□□ 0.87
SRMP19623 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
SRMP19623 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SRMP19623 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SRMP19623 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.48■□□□□ 0.87
SRMP19623 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SRMP19623 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SRMP19623 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRMP19623 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SRMP19623 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.47■□□□□ 0.87
SRMP19623 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRMP19623 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRMP19623 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SRMP19623 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SRMP19623 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SRMP19623 AC079834.2-201ENST00000609776 1949 ntBASIC20.47■□□□□ 0.87
SRMP19623 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.46■□□□□ 0.87
SRMP19623 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
SRMP19623 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SRMP19623 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.46■□□□□ 0.87
SRMP19623 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SRMP19623 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SRMP19623 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.45■□□□□ 0.86
SRMP19623 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SRMP19623 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SRMP19623 MIR6089-201ENST00000616698 64 ntBASIC20.45■□□□□ 0.86
SRMP19623 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms